RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 SMG9Q9H0W8 520 aaKnown RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 ZDHHC6Q9H6R6 413 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 PAK1IP1Q9NWT1 392 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 CD84Q9UIB8 345 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 TMED5Q9Y3A6 229 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 U3KQV3 271 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 LOC100130705A0A1B0GUX0 176 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 UGT2B4P06133 528 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 ACPPP15309 386 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 ZNF182P17025 639 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 CCNA2P20248 432 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 ITPKAP23677 461 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 ATN1P54259 1190 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 MTAPQ13126 283 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 XKR5Q6UX68 686 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 DDX53Q86TM3 631 aaKnown RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 ZC3H7AQ8IWR0 971 aaKnown RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 BPIFB6Q8NFQ5 453 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 SKA2Q8WVK7 121 aaPredicted RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 LZICQ8WZA0 190 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 CPEB1Q9BZB8 566 aaKnown RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 BRD9Q9H8M2 597 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 THG1LQ9NWX6 298 aaKnown RBP20.46■□□□□ 0.87
LIMS2-214ENST00000476932 C3orf18Q9UK00 162 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 NAALAD2Q9Y3Q0 740 aa20.46■□□□□ 0.87
LIMS2-214ENST00000476932 SERTM1A2A2V5 107 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 E2F6O75461 281 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 PLA2G16P53816 162 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 SP140Q13342 867 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 FRG2Q64ET8 278 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 CPZQ66K79 652 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 DOK6Q6PKX4 331 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 CYP2U1Q7Z449 544 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 RASGRP3Q8IV61 690 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 FAM9CQ8IZT9 166 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 FBLIM1Q8WUP2 373 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 FRG2BQ96QU4 278 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 BARD1Q99728 777 aaKnown RBP20.45■□□□□ 0.86
LIMS2-214ENST00000476932 DNAJC11Q9NVH1 559 aa20.45■□□□□ 0.86
LIMS2-214ENST00000476932 CXorf51AA0A1B0GTR3 108 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 LEFTY2O00292 366 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 SLC1A7O00341 560 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 RFXANKO14593 260 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 SLC16A6O15403 523 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 SGTAO43765 313 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 GNRH1P01148 92 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 CD22P20273 847 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 MAPK1P28482 360 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 TPD52P55327 224 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-214ENST00000476932 SPIDRQ14159 915 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 TBC1D25Q3MII6 688 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 NOXRED1Q6NXP6 359 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 MSANTD1Q6ZTZ1 278 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 GPR155Q7Z3F1 870 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 ARL10Q8N8L6 244 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 CHST14Q8NCH0 376 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 CAPNS2Q96L46 248 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 EXD2Q9NVH0 621 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 ERVK-11Q9UQG0 969 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 NOL3O60936 208 aaKnown RBP20.44■□□□□ 0.86
LIMS2-214ENST00000476932 MTX2O75431 263 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 HIST1H2AGP0C0S8 130 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-214ENST00000476932 ATP1B2P14415 290 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-214ENST00000476932 HIST1H2ADP20671 130 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 PFN3P60673 137 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 TMED1Q13445 227 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 CARD16Q5EG05 197 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 ZC3H12BQ5HYM0 836 aaKnown RBP20.44■□□□□ 0.86
LIMS2-214ENST00000476932 PLEKHS1Q5SXH7 462 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 RAB2BQ8WUD1 216 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 NELL1Q92832 810 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 MUL1Q969V5 352 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 FKBP10Q96AY3 582 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 HIST1H2AHQ96KK5 128 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 HIST1H2AJQ99878 128 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 H2AFJQ9BTM1 129 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 EBPLQ9BY08 206 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 GPN2Q9H9Y4 310 aaPredicted RBP20.44■□□□□ 0.86
LIMS2-214ENST00000476932 SPG21Q9NZD8 308 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 ABCG2Q9UNQ0 655 aa20.44■□□□□ 0.86
LIMS2-214ENST00000476932 SLC16A5O15375 505 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 PFDN1O60925 122 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 SCN2BO60939 215 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 LILRB3O75022 631 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 MITFO75030 526 aaPredicted RBP20.43■□□□□ 0.86
LIMS2-214ENST00000476932 MAP4P27816 1152 aaKnown RBP20.43■□□□□ 0.86
LIMS2-214ENST00000476932 WNT3P56703 355 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 UGT8Q16880 541 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 DUS1LQ6P1R4 473 aaKnown RBP20.43■□□□□ 0.86
LIMS2-214ENST00000476932 SHQ1Q6PI26 577 aaKnown RBP20.43■□□□□ 0.86
LIMS2-214ENST00000476932 Q6ZNX1 250 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 SERPINA11Q86U17 422 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 CYP4Z1Q86W10 505 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 HIPK1Q86Z02 1210 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 ZDHHC21Q8IVQ6 265 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 MAGED4Q96JG8 741 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 REXO4Q9GZR2 422 aaKnown RBP20.43■□□□□ 0.86
LIMS2-214ENST00000476932 GABARAPL1Q9H0R8 117 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 ATG10Q9H0Y0 220 aa20.43■□□□□ 0.86
LIMS2-214ENST00000476932 SLCO3A1Q9UIG8 710 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms