RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ENKD1Q9H0I2 346 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 C10orf88Q9H8K7 445 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF304Q9HCX3 659 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF282Q9UDV7 671 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF835Q9Y2P0 537 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 MEMO1Q9Y316 297 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 LUC7L2Q9Y383 392 aaKnown RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 NEU2Q9Y3R4 380 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 HYOU1Q9Y4L1 999 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 IGHV1-45A0A0A0MS14 117 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 HYKKA2RU49 373 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 OR5H15A6NDH6 313 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 H7C0S8 307 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 PRAMEF2O60811 474 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 CTSVO60911 334 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 WFS1O76024 890 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 GYPCP04921 128 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 SLC1A1P43005 524 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 VSX2P58304 361 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 PMP22Q01453 160 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 EEF1A2Q05639 463 aaKnown RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 CACNG1Q06432 222 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 ASTE1Q2TB18 679 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 TFDP3Q5H9I0 405 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 WASHC2DQ5SRD0 308 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 CNSTQ6PJW8 725 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 Q6ZPB1 254 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 TAX1BP1Q86VP1 789 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 C2orf73Q8N5S3 287 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 AMER2Q8N7J2 671 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 THAP3Q8WTV1 239 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 SLC22A18Q96BI1 424 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 TREX2Q9BQ50 279 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 INTS7Q9NVH2 962 aaKnown RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 SMARCAL1Q9NZC9 954 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-213ENST00000476777 HEATR5BQ9P2D3 2071 aa10.83□□□□□ -0.68
BRCA1-213ENST00000476777 IDSB3KWA1 339 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 SRPX2O60687 465 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 S1PR4O95977 384 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 FTH1P02794 183 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 MYBL2P10244 700 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 ITGAMP11215 1152 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 CD9P21926 228 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 COMTP21964 271 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 PSMB4P28070 264 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 RBL1P28749 1068 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 EMP2P54851 167 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 CSNK1G2P78368 415 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 PLOD1Q02809 727 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 GRB7Q14451 532 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 DNAJC21Q5F1R6 531 aaKnown RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 ITPRIPL1Q6GPH6 555 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 PRMT9Q6P2P2 845 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 PACS1Q6VY07 963 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 NCCRP1Q6ZVX7 275 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 SPPL2CQ8IUH8 684 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 TMTC1Q8IUR5 882 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 SUN3Q8TAQ9 357 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 ZUFSPQ96AP4 578 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 IQCDQ96DY2 449 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 MAGED4Q96JG8 741 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 GPR137Q96N19 417 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 IL17FQ96PD4 163 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 TBL1YQ9BQ87 522 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 ARNT2Q9HBZ2 717 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 GPAMQ9HCL2 828 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 RIC8BQ9NVN3 520 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 NLE1Q9NVX2 485 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 STMN3Q9NZ72 180 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 STOX2Q9P2F5 926 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 CIDEBQ9UHD4 219 aa10.82□□□□□ -0.68
BRCA1-213ENST00000476777 AAR2Q9Y312 384 aaKnown RBP10.82□□□□□ -0.68
BRCA1-213ENST00000476777 hCG_1818297A0A087WSY0 165 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 LOC102723996A0A087X1L8 192 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 LOC105369274A0A096LPK9 316 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 LOC102723532A0A0G2JNH3 316 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 TARM1B6A8C7 271 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 QSOX1O00391 747 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 NADKO95544 446 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-213ENST00000476777 UQCRHP07919 91 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 CXCR2P25025 360 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 SPARCL1Q14515 664 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 SF1Q15637 639 aaKnown RBP10.81□□□□□ -0.68
BRCA1-213ENST00000476777 SYTL3Q4VX76 610 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 KRTCAP3Q53RY4 240 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 ZNF766Q5HY98 468 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 ABHD17BQ5VST6 288 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 FRMPD2BQ6IN97 320 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 MEX3BQ6ZN04 569 aaKnown RBP10.81□□□□□ -0.68
BRCA1-213ENST00000476777 OR4N4Q8N0Y3 316 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 OR2L8Q8NGY9 312 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 CDKN2AIPNLQ96HQ2 116 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 C10orf90Q96M02 699 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 ZC3H7BQ9UGR2 993 aaKnown RBP10.81□□□□□ -0.68
BRCA1-213ENST00000476777 FEZ2Q9UHY8 353 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-213ENST00000476777 KLK4Q9Y5K2 254 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 CSPG4Q6UVK1 2322 aa10.81□□□□□ -0.68
BRCA1-213ENST00000476777 VPS13CQ709C8 3753 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms