RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SKA2Q8WVK7 121 aaPredicted RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 FAM162AQ96A26 154 aa16.01■□□□□ 0.15
TMEM53-208ENST00000476724 PAIP1Q9H074 479 aaKnown RBP16.01■□□□□ 0.15
TMEM53-208ENST00000476724 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 G3V2T6 193 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 THRBP10828 461 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 RECQLP46063 649 aaPredicted RBP16■□□□□ 0.15
TMEM53-208ENST00000476724 DCDC1P59894 354 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 PTCHD3Q3KNS1 767 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 TTC23Q5W5X9 447 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 GPR149Q86SP6 731 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 CALHM3Q86XJ0 350 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 NPAS3Q8IXF0 933 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 CELF5Q8N6W0 485 aaKnown RBP16■□□□□ 0.15
TMEM53-208ENST00000476724 TERB1Q8NA31 727 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 TIFAQ96CG3 184 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 ABHD8Q96I13 439 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 GDF15Q99988 308 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 SFXN1Q9H9B4 322 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 SLC28A3Q9HAS3 691 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 DCAF13Q9NV06 445 aaKnown RBP16■□□□□ 0.15
TMEM53-208ENST00000476724 DNAJC11Q9NVH1 559 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 DDX18Q9NVP1 670 aaKnown RBP16■□□□□ 0.15
TMEM53-208ENST00000476724 SLCO3A1Q9UIG8 710 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 MSRAQ9UJ68 235 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 TMPRSS11EQ9UL52 423 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 PCDHB14Q9Y5E9 798 aa16■□□□□ 0.15
TMEM53-208ENST00000476724 SPTBN5Q9NRC6 3674 aaKnown RBP15.99■□□□□ 0.15
TMEM53-208ENST00000476724 QSOX1O00391 747 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 LINC01565O15544 149 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 UGDHO60701 494 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 CLIC3O95833 236 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 CST1P01037 141 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 PCSK6P29122 969 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ELMSAN1Q6PJG2 1045 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 RFLNAQ6ZTI6 216 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 STK32CQ86UX6 486 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ADIPOR2Q86V24 386 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 FBXO30Q8TB52 745 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 NPLQ9BXD5 320 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-208ENST00000476724 FAM83DQ9H4H8 585 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 IKZF5Q9H5V7 419 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 WNT9AO14904 365 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 CREG1O75629 220 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 RECQL5O94762 991 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-208ENST00000476724 PAPLNO95428 1278 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 WEE1P30291 646 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 VIPR1P32241 457 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 HLCSP50747 726 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ABHD18Q0P651 414 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 DHCR24Q15392 516 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 DPY19L1Q2PZI1 675 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 FAM78AQ5JUQ0 283 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 GCNT7Q6ZNI0 430 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ADHFE1Q8IWW8 467 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 OFCC1Q8IZS5 231 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ZNF420Q8TAQ5 688 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-208ENST00000476724 CSGALNACT1Q8TDX6 532 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ASZ1Q8WWH4 475 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 FAM120BQ96EK7 910 aaKnown RBP15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ZFYVE19Q96K21 471 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 TUBA1CQ9BQE3 449 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 CPPED1Q9BRF8 314 aaPredicted RBP15.99■□□□□ 0.15
TMEM53-208ENST00000476724 LMAN2LQ9H0V9 348 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 ABCG8Q9H221 673 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 SERHLQ9NQF3 203 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 USE1Q9NZ43 259 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 MARK1Q9P0L2 795 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 DLGAP4Q9Y2H0 992 aa15.99■□□□□ 0.15
TMEM53-208ENST00000476724 AREL1O15033 823 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 FTH1P02794 183 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 CYP17A1P05093 508 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 PCNAP12004 261 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 JUPP14923 745 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 RPL10P27635 214 aaKnown RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 GZMMP51124 257 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 NUP107P57740 925 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 PHC1P78364 1004 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 ZXDCQ2QGD7 858 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 LIPJQ5W064 366 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 FRG2Q64ET8 278 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 NEK5Q6P3R8 708 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 ENPP6Q6UWR7 440 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 Q6ZVU0 165 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 GET4Q7L5D6 327 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 DET1Q7L5Y6 550 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 GPR180Q86V85 440 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 RASGRP3Q8IV61 690 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 OR2A12Q8NGT7 310 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 SORCS1Q8WY21 1168 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 FGF13Q92913 245 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 GFM2Q969S9 779 aaKnown RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 FBXL8Q96CD0 374 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 OTUB2Q96DC9 234 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 CNDP2Q96KP4 475 aaKnown RBP15.98■□□□□ 0.15
TMEM53-208ENST00000476724 FRG2BQ96QU4 278 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 HEPHQ9BQS7 1158 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 TBCDQ9BTW9 1192 aa15.98■□□□□ 0.15
TMEM53-208ENST00000476724 ATXN10Q9UBB4 475 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms