RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FAM35AQ86V20 835 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PTRH1Q86Y79 214 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 NLGN4XQ8N0W4 816 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 C10orf53Q8N6V4 93 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 GDPD1Q8N9F7 314 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ZNF511Q8NB15 262 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ZMIZ2Q8NF64 920 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 OR2L5Q8NG80 312 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 OR10J5Q8NHC4 309 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 DCAKDQ8WVC6 231 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TFB1MQ8WVM0 346 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 ADAMTS14Q8WXS8 1223 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MUL1Q969V5 352 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 NARS2Q96I59 477 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 ZNF845Q96IR2 970 aaPredicted RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 SIGLEC10Q96LC7 697 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 LRFN5Q96NI6 719 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TREX2Q9BQ50 279 aaPredicted RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 DBNDD2Q9BQY9 259 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SOX7Q9BT81 388 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CCDC32Q9BV29 185 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 LGR4Q9BXB1 951 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TRIM9Q9C026 710 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SLIRPQ9GZT3 109 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 NUAK2Q9H093 628 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 OR51V1Q9H2C8 321 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 OR51B6Q9H340 312 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 FAM83DQ9H4H8 585 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 KAT8Q9H7Z6 458 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 MINDY3Q9H8M7 445 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ARMT1Q9H993 441 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TRPV4Q9HBA0 871 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 ZNF334Q9HCZ1 680 aaPredicted RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 MRPL47Q9HD33 250 aaKnown RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 DUSP22Q9NRW4 184 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 MED9Q9NWA0 146 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 SDHAF2Q9NX18 166 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 UBQLN2Q9UHD9 624 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 DCDC2Q9UHG0 476 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 KIF25Q9UIL4 384 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 GDF2Q9UK05 429 aaPredicted RBP4.06□□□□□ -1.76
CD55-208ENST00000476590 NAGPAQ9UK23 515 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CA14Q9ULX7 337 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 DLGAP4Q9Y2H0 992 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 PEX16Q9Y5Y5 336 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 CNTNAP2Q9UHC6 1331 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 FMN2Q9NZ56 1722 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TMEM2Q9UHN6 1383 aa4.06□□□□□ -1.76
CD55-208ENST00000476590 TULP4Q9NRJ4 1543 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 POM121BA6NF01 834 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TMEM191CA6NGB0 347 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 RFPL4AA6NLU0 287 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF891A8MT65 544 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 E5RJQ4 531 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 E9PAM4 449 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 RFPL4AL1F8VTS6 287 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 H0YIV9 168 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LDLRAD4O15165 306 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 GSTA4O15217 222 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 OGTO15294 1046 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 HCRTR2O43614 444 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LPXNO60711 386 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 STX11O75558 287 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 NSA2O95478 260 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 OPN1LWP04000 364 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 RAF1P04049 648 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ALPPP05187 535 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TPOP07202 933 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 HCKP08631 526 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 SBK2P0C263 348 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 OR4E1P0C645 316 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 JMJD7P0C870 316 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ATF2P15336 505 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 BPIP17213 487 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 CTPS1P17812 591 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TFE3P19532 575 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 PTBP1P26599 531 aaKnown RBP eCLIP4.05□□□□□ -1.762e-7■■□□□ 13.5
CD55-208ENST00000476590 CRATP43155 626 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ETV4P43268 484 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 KCNC1P48547 511 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 CLCNKAP51800 687 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 EPHA5P54756 1037 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 YBEYP58557 167 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 SLC26A5P58743 744 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 CSTF1Q05048 431 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 SOX4Q06945 474 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 FOXO1Q12778 655 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LMAN2Q12907 356 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 DGKZQ13574 1117 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PWP1Q13610 501 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 MBTPS1Q14703 1052 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LRRC26Q2I0M4 334 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF528Q3MIS6 628 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF404Q494X3 552 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 BCL7AQ4VC05 210 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PIGGQ5H8A4 983 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 MTX3Q5HYI7 312 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF484Q5JVG2 852 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 RBM48Q5RL73 367 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 DDI2Q5TDH0 399 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms