RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 XKR3Q5GH77 459 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 BTNL8Q6UX41 500 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 DZIP1Q86YF9 867 aaKnown RBP5.46□□□□□ -1.54
VPS50-212ENST00000476413 RFLNBQ8N5W9 214 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 OR13A1Q8NGR1 328 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 CD101Q93033 1021 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 P2RX5Q93086 422 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 PSD2Q9BQI7 771 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 MMADHCQ9H3L0 296 aaPredicted RBP5.46□□□□□ -1.54
VPS50-212ENST00000476413 TLE6Q9H808 572 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 TMEM206Q9H813 350 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 TRPV4Q9HBA0 871 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 ZFP57Q9NU63 452 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 CNIH4Q9P003 139 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 LEF1Q9UJU2 399 aaPredicted RBP5.46□□□□□ -1.54
VPS50-212ENST00000476413 FAF1Q9UNN5 650 aaPredicted RBP5.46□□□□□ -1.54
VPS50-212ENST00000476413 A0A1W2PPW3 197 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 ACOT8O14734 319 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 ARPC2O15144 300 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 PLGP00747 810 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 FRMD6-AS1P0C7T7 363 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 EFNA1P20827 205 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 CDX1P47902 265 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 VAMP7P51809 220 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 DVL1P1P54792 670 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 GAS1P54826 345 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 TECRLQ5HYJ1 363 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 GLRA4Q5JXX5 417 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 RTN4RL2Q86UN3 420 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 EXOC3L1Q86VI1 746 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 TUSC5Q8IXB3 177 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 CARNMT1Q8N4J0 409 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 TMCO5AQ8N6Q1 288 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 NAT8LQ8N9F0 302 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 OR7G3Q8NG95 312 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 OR52N5Q8NH56 324 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 PHLDA1Q8WV24 401 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 BSCL2Q96G97 398 aaPredicted RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 CCDC3Q9BQI4 270 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 UTP14AQ9BVJ6 771 aaKnown RBP5.45□□□□□ -1.54
VPS50-212ENST00000476413 PRRG4Q9BZD6 226 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 RIPK3Q9Y572 518 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 TNFRSF18Q9Y5U5 241 aa5.45□□□□□ -1.54
VPS50-212ENST00000476413 FLRT2O43155 660 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 KCNAB3O43448 404 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 NME6O75414 186 aaPredicted RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 LUC7L3O95232 432 aaKnown RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 NR3C1P04150 777 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 ANKRD34CP0C6C1 535 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 IGHV4-31P0DP07 118 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 IGHV4-38-2P0DP08 117 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 CETPP11597 493 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 LIFP15018 202 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 ATP6V1B1P15313 513 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 ADARP55265 1226 aaKnown RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 ERVFC1-1P60608 527 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 ARL16Q0P5N6 197 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 ILF2Q12905 390 aaKnown RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 WBP2NLQ6ICG8 309 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 FAM166AQ6J272 317 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 PLBD1Q6P4A8 553 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 PRSS55Q6UWB4 352 aaPredicted RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 CCDC91Q7Z6B0 441 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 LGI2Q8N0V4 545 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 RYBPQ8N488 228 aaPredicted RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 METTL27Q8N6F8 245 aaPredicted RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 MAB21L3Q8N8X9 362 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 AMER3Q8N944 861 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 KLHDC9Q8NEP7 349 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 AFAP1L1Q8TED9 768 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 FCAMRQ8WWV6 532 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 TEKT1Q969V4 418 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 TRMT61BQ9BVS5 477 aaKnown RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 ZNF350Q9GZX5 532 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 RETREG1Q9H6L5 497 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 PHPT1Q9NRX4 125 aaPredicted RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 ABCB8Q9NUT2 735 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 CWC25Q9NXE8 425 aaPredicted RBP5.44□□□□□ -1.54
VPS50-212ENST00000476413 DONSONQ9NYP3 566 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 TAAR2Q9P1P5 351 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 MTRRQ9UBK8 725 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 STUB1Q9UNE7 303 aa5.44□□□□□ -1.54
VPS50-212ENST00000476413 IGKV2D-30A0A075B6S6 120 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 IGLV9-49A0A0B4J1Y8 123 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 CCL24O00175 119 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 PRKRAO75569 313 aaKnown RBP5.43□□□□□ -1.54
VPS50-212ENST00000476413 RPS6KA5O75582 802 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 BAG3O95817 575 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 SERPING1P05155 500 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 CCKARP32238 428 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 ASIC1P78348 528 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 WDR38Q5JTN6 314 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 CCNYL2Q5T2Q4 361 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 ZNF449Q6P9G9 518 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 CREBRFQ8IUR6 639 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 EID3Q8N140 333 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 DNAJC22Q8N4W6 341 aa5.43□□□□□ -1.54
VPS50-212ENST00000476413 LMNTD1Q8N9Z9 388 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms