RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ANXA5P08758 320 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 EPCAMP16422 314 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 DNAJB1P25685 340 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NNMTP40261 264 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ARSFP54793 590 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NFKB2Q00653 900 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RAPSNQ13702 412 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NFE2L1Q14494 772 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 UPP1Q16831 310 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 PKDCCQ504Y2 493 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 USP39Q53GS9 565 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 KHDRBS2Q5VWX1 349 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SULT1C3Q6IMI6 304 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 DUS1LQ6P1R4 473 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 FUT10Q6P4F1 479 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 POMZP3Q6PJE2 187 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TXNDC11Q6PKC3 985 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 Q6ZVL8 140 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM199Q8N511 208 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TTC29Q8NA56 475 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 WDR36Q8NI36 951 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 LKAAEAR1Q8TD35 194 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ZFP90Q8TF47 636 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 BTN2A2Q8WVV5 523 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 GAB3Q8WWW8 586 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 MAGEB10Q96LZ2 347 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 COG8Q96MW5 612 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SH3GL1Q99961 368 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TRPV5Q9NQA5 729 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 C3orf18Q9UK00 162 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RPL26L1Q9UNX3 145 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CLCA2Q9UQC9 943 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 YBX2Q9Y2T7 364 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CEPT1Q9Y6K0 416 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 GLYATL1P3A0A0U1RQE8 302 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 A0A0U1RQF3 1178 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF197O14709 1029 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SNPHO15079 494 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 PLOD3O60568 738 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NDUFS2O75306 463 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ALDH1A2O94788 518 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 LRG1P02750 347 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 FGF1P05230 155 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 PGRP06401 933 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ACPPP15309 386 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 PFKLP17858 780 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 MSH3P20585 1137 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 VARSP26640 1264 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SLC6A4P31645 630 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RYKP34925 604 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 BUD31P41223 144 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SLC19A1P41440 591 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CTSOP43234 321 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 STC1P52823 247 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF57Q68EA5 555 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 PGM2L1Q6PCE3 622 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 AFTPHQ6ULP2 937 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TIFABQ6ZNK6 161 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CFAP206Q8IYR0 622 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 AHI1Q8N157 1196 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM132CQ8N3T6 1108 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TRPV3Q8NET8 790 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 BRSK1Q8TDC3 778 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NETO1Q8TDF5 533 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 MYO19Q96H55 970 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ACBD6Q9BR61 282 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 FUNDC2Q9BWH2 189 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 UGT2B28Q9BY64 529 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RSPH9Q9H1X1 276 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SGK2Q9HBY8 427 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 OLAHQ9NV23 265 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 DNAJC27Q9NZQ0 273 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 STOX2Q9P2F5 926 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 MTRRQ9UBK8 725 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 PRSS21Q9Y6M0 314 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 BOD1L1Q8NFC6 3051 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ANKRD66B4E2M5 251 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NDUFB5O43674 189 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 AP2A2O94973 939 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF26P17031 533 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RHOQP17081 205 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ENGP17813 658 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 KIR3DL1P43629 444 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TGM4P49221 684 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 RAB8AP61006 207 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CSNK2BP67870 215 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CD83Q01151 205 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CD47Q08722 323 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 SPCS2Q15005 226 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ADHFE1Q8IWW8 467 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 OR9Q1Q8NGQ5 310 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 STON2Q8WXE9 905 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 MRPS31Q92665 395 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 NECAB3Q96P71 396 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 IL12RB2Q99665 862 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CCDC28BQ9BUN5 200 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 IKZF5Q9H5V7 419 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ZBTB20Q9HC78 741 aaPredicted RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 TBC1D14Q9P2M4 693 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms