RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 APOBEC1P41238 236 aaKnown RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 SLC6A12P48065 614 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 HTR6P50406 440 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 RAD23BP54727 409 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 SH3BGRP55822 239 aaPredicted RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 RUNX1T1Q06455 604 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 ARHGAP1Q07960 439 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 MTX1Q13505 466 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CUL2Q13617 745 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 LAMB3Q13751 1172 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 VEZF1Q14119 521 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CCNYL2Q5T2Q4 361 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 GCNT6Q5T4J0 391 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 PRAMEF7Q5VXH5 474 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 FRG2Q64ET8 278 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 SULT1C3Q6IMI6 304 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 SLC16A12Q6ZSM3 486 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 TMPRSS11BQ86T26 416 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 ASPGQ86U10 573 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 MEX3DQ86XN8 651 aaKnown RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 ADGRG3Q86Y34 549 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 APCDD1Q8J025 514 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 ENGASEQ8NFI3 743 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 OR56B1Q8NGI3 324 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 OR52K2Q8NGK3 314 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 OR5M8Q8NGP6 311 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 PRSS3P2Q8NHM4 247 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM163Q8TC26 289 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 RNF139Q8WU17 664 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 SSMEM1Q8WWF3 244 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 PYCR2Q96C36 320 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CCDC51Q96ER9 411 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 QRFPRQ96P65 431 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 C17orf62Q9BQA9 187 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 PRSS22Q9GZN4 317 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 SCAND2PQ9GZW5 306 aaPredicted RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 KCNN2Q9H2S1 579 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CATSPERBQ9H7T0 1116 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 MMP25Q9NPA2 562 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 NMRK1Q9NWW6 199 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 RCC2Q9P258 522 aaKnown RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 ATP6V1HQ9UI12 483 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 RUVBL2Q9Y230 463 aaKnown RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 ZSCAN21Q9Y5A6 473 aaPredicted RBP4□□□□□ -1.77
VPS13D-207ENST00000476169 ZMYM2Q9UBW7 1377 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 WIZO95785 1651 aa4□□□□□ -1.77
VPS13D-207ENST00000476169 CFTRP13569 1480 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 WDR33Q9C0J8 1336 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 A0A0B4J203 849 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 HYKKA2RU49 373 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CTAGE15A4D2H0 777 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 H0YC42 278 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 H0YIG0 161 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 KCNN4O15554 427 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ZIC3O60481 467 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 KRT6BP04259 564 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CTAGE8P0CG41 777 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SMIM18P0DKX4 95 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CALCBP10092 127 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 THRBP10828 461 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SFTPCP11686 197 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TMOD1P28289 359 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 STX2P32856 288 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CDKN1AP38936 164 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 MMP13P45452 471 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 KRT6CP48668 564 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 FMO5P49326 533 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CNN1P51911 297 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 P2RX3P56373 397 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 HUNKP57058 714 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SELENOVP59797 346 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ST3GAL1Q11201 340 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TROAPQ12815 778 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 IL24Q13007 206 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 KRT31Q15323 416 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 STXBP2Q15833 593 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CTF1Q16619 201 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 PTGISQ16647 500 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 DUSP6Q16828 381 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TPD52L1Q16890 204 aaPredicted RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 IMMTQ16891 758 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CFAP157Q5JU67 520 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 Q5PR19 223 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ARHGAP11AQ6P4F7 1023 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 BTNL8Q6UX41 500 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 DLEU7Q6UYE1 221 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CTAGE6Q86UF2 777 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 GGNQ86UU5 652 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 CTAGE4Q8IX94 777 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 THEM5Q8N1Q8 247 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 GCSAMQ8N6F7 178 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 C1orf52Q8N6N3 182 aaKnown RBP3.99□□□□□ -1.77
VPS13D-207ENST00000476169 SLC38A9Q8NBW4 561 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 OR52M1Q8NGK5 317 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 OR4A16Q8NH70 328 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 ELP5Q8TE02 316 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 DDB2Q92466 427 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 TRIB2Q92519 343 aa3.99□□□□□ -1.77
VPS13D-207ENST00000476169 RND1Q92730 232 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms