RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 GRM7Q14831 915 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 NKG7Q16617 165 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 FASTKD1Q53R41 847 aaKnown RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ZC3H12BQ5HYM0 836 aaKnown RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 TCTE1Q5JU00 501 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 FCRL6Q6DN72 434 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 FIGLAQ6QHK4 219 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 IGFL2Q6UWQ7 119 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 PPP1R21Q6ZMI0 780 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ZNF534Q76KX8 674 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 TAX1BP1Q86VP1 789 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 SYCE1Q8N0S2 351 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 C2orf73Q8N5S3 287 aaPredicted RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 DNAAF3Q8N9W5 541 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 TTC29Q8NA56 475 aaPredicted RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ST6GALNAC3Q8NDV1 305 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 OR2L8Q8NGY9 312 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 OR4L1Q8NH43 312 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 CFAP61Q8NHU2 1237 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 LKAAEAR1Q8TD35 194 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 COG1Q8WTW3 980 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 UBE2Q2Q8WVN8 375 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ASZ1Q8WWH4 475 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ZNF592Q92610 1267 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 PEX13Q92968 403 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ITPKCQ96DU7 683 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ZNF285Q96NJ3 590 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 IL17FQ96PD4 163 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 SELENOSQ9BQE4 189 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 CARD6Q9BX69 1037 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 RAB11FIP5Q9BXF6 653 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ZFAND3Q9H8U3 227 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 MRM3Q9HC36 420 aaKnown RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 AGPAT4Q9NRZ5 378 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 CUTCQ9NTM9 273 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 INTS7Q9NVH2 962 aaKnown RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 PGPEP1Q9NXJ5 209 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 CDC23Q9UJX2 597 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 NOVA2Q9UNW9 492 aaKnown RBP6.9□□□□□ -1.3
UBE4B-208ENST00000475795 TCAF1Q9Y4C2 921 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 CSAG2Q9Y5P2 127 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 HS3ST3B1Q9Y662 390 aa6.9□□□□□ -1.3
UBE4B-208ENST00000475795 PCNX1Q96RV3 2341 aa6.9□□□□□ -1.31
UBE4B-208ENST00000475795 CENPEQ02224 2701 aa6.9□□□□□ -1.31
UBE4B-208ENST00000475795 FITM1A5D6W6 292 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 VSTM2BA6NLU5 285 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 IQCF5A8MTL0 148 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 TARM1B6A8C7 271 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 E2F3O00716 465 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 PRMT5O14744 637 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 PRICKLE3O43900 615 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 SLCO2B1O94956 709 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 FTCDO95954 541 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 APOA4P06727 396 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 MCM3P25205 808 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 STIP1P31948 543 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 GRIA1P42261 906 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 GRIA3P42263 894 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 TSFMP43897 325 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 ZNF75DP51815 510 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 PRAMEP78395 509 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 TMED2Q15363 201 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 SF1Q15637 639 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 OASLQ15646 514 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 RBBP7Q16576 425 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 HIF1AQ16665 826 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 TUBB8Q3ZCM7 444 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 AARS2Q5JTZ9 985 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 AGAP7PQ5VUJ5 663 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 IRAK1BP1Q5VVH5 260 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 B3GNTL1Q67FW5 361 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 KIRREL2Q6UWL6 708 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 NLRP9Q7RTR0 991 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 KIAA1328Q86T90 577 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 KCNMB4Q86W47 210 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 KRT222Q8N1A0 295 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 METTL27Q8N6F8 245 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 LMNTD1Q8N9Z9 388 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 OR6P1Q8NGX9 317 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 ATG4AQ8WYN0 398 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 ZUFSPQ96AP4 578 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 MRFAP1L1Q96HT8 127 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 HES6Q96HZ4 224 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 VPS50Q96JG6 964 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 ZNF778Q96MU6 729 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 AGAP4Q96P64 663 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 LHPPQ9H008 270 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 SOX17Q9H6I2 414 aaPredicted RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 SEMA3GQ9NS98 782 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 IL1RAPL1Q9NZN1 696 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 CTSFQ9UBX1 484 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 CIDEBQ9UHD4 219 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 GNPTGQ9UJJ9 305 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 NXT1Q9UKK6 140 aaKnown RBP6.89□□□□□ -1.31
UBE4B-208ENST00000475795 SLC39A10Q9ULF5 831 aa6.89□□□□□ -1.31
UBE4B-208ENST00000475795 CRYBG3Q68DQ2 2970 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms