RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SLC6A20Q9NP91 592 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SLAMF7Q9NQ25 335 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 LZTFL1Q9NQ48 299 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CUTCQ9NTM9 273 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 IRAK4Q9NWZ3 460 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 IL1RAPL1Q9NZN1 696 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 C5AR2Q9P296 337 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 PLEKHB1Q9UF11 243 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 ERRFI1Q9UJM3 462 aaPredicted RBP6.72□□□□□ -1.33
HDAC3-207ENST00000475549 ANAPC5Q9UJX4 755 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 FBXL4Q9UKA2 621 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SLC39A10Q9ULF5 831 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SRPK3Q9UPE1 567 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 B3GNT3Q9Y2A9 372 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 PADI2Q9Y2J8 665 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 CRYL1Q9Y2S2 319 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 NEU2Q9Y3R4 380 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 HS3ST3B1Q9Y662 390 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 MAU2Q9Y6X3 613 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 NOTCH2Q04721 2471 aa6.72□□□□□ -1.33
HDAC3-207ENST00000475549 SPTBP11277 2137 aa6.71□□□□□ -1.33
HDAC3-207ENST00000475549 SPTAN1Q13813 2472 aaKnown RBP6.71□□□□□ -1.33
HDAC3-207ENST00000475549 MED13Q9UHV7 2174 aa6.71□□□□□ -1.33
HDAC3-207ENST00000475549 A0A0J9YVX5 310 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 HYKKA2RU49 373 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ARHGEF33A8MVX0 844 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PEX12O00623 359 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 DSCR3O14972 297 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 SRPX2O60687 465 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 NDUFS3O75489 264 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 AGFG2O95081 481 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 CLDN1O95832 211 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ALBP02768 609 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 RPN2P04844 631 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ERGP11308 486 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PPARGP37231 505 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 CLCN7P51798 805 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 EFNA3P52797 238 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ARSFP54793 590 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ADARP55265 1226 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 VSX2P58304 361 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 BASP1P80723 227 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 GRM7Q14831 915 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 NR6A1Q15406 480 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 TRIP13Q15645 432 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 HIF1AQ16665 826 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 TYSND1Q2T9J0 566 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ACSBG2Q5FVE4 666 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ZC3H12BQ5HYM0 836 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 AARS2Q5JTZ9 985 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PRAMEF13Q5VWM6 474 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ATG9BQ674R7 924 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ZNF549Q6P9A3 640 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 LRRC8BQ6P9F7 803 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 IGFL2Q6UWQ7 119 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 CYHR1Q6ZMK1 362 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 Q6ZS92 163 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 LRRC6Q86X45 466 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 HPS6Q86YV9 775 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PARP9Q8IXQ6 854 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 LRRC56Q8IYG6 542 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 TXLNBQ8N3L3 684 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 OR11G2Q8NGC1 345 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 GIMAP7Q8NHV1 300 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 SSC4DQ8WTU2 575 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 UBE2Q2Q8WVN8 375 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 FKBP10Q96AY3 582 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 NACC2Q96BF6 587 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 SLC22A18Q96BI1 424 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 C10orf90Q96M02 699 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PANX3Q96QZ0 392 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PKP4Q99569 1192 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 MIPEPQ99797 713 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 MRM3Q9HC36 420 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ATP13A2Q9NQ11 1180 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 TXLNGQ9NUQ3 528 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 BFARQ9NZS9 450 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ZC3H7BQ9UGR2 993 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 NDOR1Q9UHB4 597 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 GNPTGQ9UJJ9 305 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 TSR3Q9UJK0 312 aaKnown RBP6.71□□□□□ -1.34
HDAC3-207ENST00000475549 CDC23Q9UJX2 597 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 SOX13Q9UN79 622 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 ZKSCAN5Q9Y2L8 839 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 PCDHGA10Q9Y5H3 936 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 CELSR2Q9HCU4 2923 aa6.71□□□□□ -1.34
HDAC3-207ENST00000475549 TNRC6AQ8NDV7 1962 aaKnown RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 ZCWPW2A0A1B0GU75 182 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 OR2A25A4D2G3 310 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 E7ENX8 843 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 H0YGG7 62 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 MYO1CO00159 1063 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 FFAR3O14843 346 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 GPR42O15529 346 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 CEP104O60308 925 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 KDM1AO60341 852 aa6.7□□□□□ -1.34
HDAC3-207ENST00000475549 PSIP1O75475 530 aaKnown RBP6.7□□□□□ -1.34
HDAC3-207ENST00000475549 KLHL18O94889 574 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms