RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CDHR3Q6ZTQ4 885 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 UBE2R2Q712K3 238 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TRIM73Q86UV7 250 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TAX1BP1Q86VP1 789 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 AMIGO1Q86WK6 493 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 NKAPQ8N5F7 415 aaKnown RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 RCBTB1Q8NDN9 531 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 OR4D9Q8NGE8 314 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 OR9A1PQ8NGU1 263 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 OR2L8Q8NGY9 312 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 OR10G6Q8NH81 332 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SNRNP27Q8WVK2 155 aaKnown RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 NCSTNQ92542 709 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 KIAA1191Q96A73 305 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 RAD51AP1Q96B01 352 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 GFM1Q96RP9 751 aaKnown RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 ATOH8Q96SQ7 321 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 MAP3K3Q99759 626 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 PITPNM3Q9BZ71 974 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 RAB33BQ9H082 229 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SRMSQ9H3Y6 488 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SYNPO2LQ9H987 977 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 PARVBQ9HBI1 364 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SYTL2Q9HCH5 934 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 STARD5Q9NSY2 213 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 HRASLS2Q9NWW9 162 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 UTP6Q9NYH9 597 aaKnown RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 OR6C2Q9NZP2 312 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 STOX2Q9P2F5 926 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 PLEKHB1Q9UF11 243 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TBK1Q9UHD2 729 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 POLG2Q9UHN1 485 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 LGALS13Q9UHV8 139 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 POMT2Q9UKY4 750 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SH2B3Q9UQQ2 575 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 ACOT9Q9Y305 439 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 ASB1Q9Y576 335 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SCN3AQ9NY46 2000 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CACNA1DQ01668 2161 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TLN1Q9Y490 2541 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 IGKV1-8A0A0C4DH67 115 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 TARM1B6A8C7 271 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 GOLGA8RI6L899 631 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 AGRPO00253 132 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 TAPBPO15533 448 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 KLK10O43240 276 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 HCRTR1O43613 425 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 DUX1O43812 170 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CDH16O75309 829 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CSO75390 466 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 KLHL2O95198 593 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CATP04040 527 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PYGBP11216 843 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CDK4P11802 303 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PVRP15151 417 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 UGT2B7P16662 529 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 AMD1P17707 334 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 TFEBP19484 476 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 ELAVL4P26378 380 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CNTFP26441 200 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PRDX3P30048 256 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CCKBRP32239 447 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SHMT2P34897 504 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SLC26A3P40879 764 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 GLRBP48167 497 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SERPINB8P50452 374 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SLC12A2P55011 1212 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SP140Q13342 867 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 BIRC2Q13490 618 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SPIDRQ14159 915 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 KRT33BQ14525 404 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PLCL1Q15111 1095 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 TGFBIQ15582 683 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CLPPQ16740 277 aaPredicted RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 KRTAP21-3Q3LHN1 58 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 LINC00303Q3SY05 128 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 FBXO48Q5FWF7 155 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 TNFAIP8L3Q5GJ75 292 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 ANKS6Q68DC2 871 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 LRRC8EQ6NSJ5 796 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 IRGCQ6NXR0 463 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 AGTRAPQ6RW13 159 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 SUSD1Q6UWL2 747 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 RBM44Q6ZP01 1051 aaKnown RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 FAM92BQ6ZTR7 304 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 RAPH1Q70E73 1250 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 MYO1HQ8N1T3 1032 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 BMPERQ8N8U9 685 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PPFIBP2Q8ND30 876 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 OR2A1Q8NGT9 310 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PMEPA1Q969W9 287 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 RHBDF1Q96CC6 855 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 FBXL8Q96CD0 374 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 PRR11Q96HE9 360 aaPredicted RBP6.74□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC74BQ96LY2 380 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 FOPNLQ96NB1 174 aa6.74□□□□□ -1.33
LIMD1-204ENST00000474665 ZIM3Q96PE6 472 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms