RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CAV1Q03135 178 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 ZNF658BQ4V348 819 aaPredicted RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 CTSL3PQ5NE16 218 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 DUPD1Q68J44 220 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 FAM198BQ6UWH4 519 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 MED25Q71SY5 747 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 TAX1BP1Q86VP1 789 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 CCDC25Q86WR0 208 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 IGDCC3Q8IVU1 814 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 DCUN1D3Q8IWE4 304 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 TMEM102Q8N9M5 508 aaPredicted RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 EIF1ADQ8N9N8 165 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 CLEC1AQ8NC01 280 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 FBXO36Q8NEA4 188 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 DLG3Q92796 817 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 CERS2Q96G23 380 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 SAYSD1Q9NPB0 183 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 GPR83Q9NYM4 423 aa14.57□□□□□ -0.08
VARS-223ENST00000474643 TSR3Q9UJK0 312 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 PTRH2Q9Y3E5 179 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 PCDHGA9Q9Y5G4 932 aaKnown RBP14.57□□□□□ -0.08
VARS-223ENST00000474643 DPM1O60762 260 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 S1PR4O95977 384 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 F7P08709 466 aaPredicted RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 ALAS2P22557 587 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 AOAHP28039 575 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 ACADLP28330 430 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 CARSP49589 748 aaKnown RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 MPP1Q00013 466 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 SLC9A5Q14940 896 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 SF1Q15637 639 aaKnown RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 CYP2A13Q16696 494 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 SLC5A12Q1EHB4 618 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 FAM69BQ5VUD6 431 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 LCN10Q6JVE6 187 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 TLDC1Q6P9B6 456 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 UNC5DQ6UXZ4 953 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 ZNF517Q6ZMY9 492 aaPredicted RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 CAPN12Q6ZSI9 719 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 PALM2Q8IXS6 379 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 SLC22A15Q8IZD6 547 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 C2orf73Q8N5S3 287 aaPredicted RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 ZNF655Q8N720 491 aaPredicted RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 NOA1Q8NC60 698 aaKnown RBP14.56□□□□□ -0.08
VARS-223ENST00000474643 PROKR1Q8TCW9 393 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 DENND1AQ8TEH3 1009 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 PYROXD1Q8WU10 500 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 BIRC8Q96P09 236 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 IP6K3Q96PC2 410 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 OR2A14Q96R47 310 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 LRRC1Q9BTT6 524 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 RAB11FIP5Q9BXF6 653 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 PHACTR1Q9C0D0 580 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 SLAMF7Q9NQ25 335 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 SPHK1Q9NYA1 384 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 CIDEBQ9UHD4 219 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 PLCL2Q9UPR0 1127 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 TEX264Q9Y6I9 313 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 HECTD1Q9ULT8 2610 aa14.56□□□□□ -0.08
VARS-223ENST00000474643 KLHL41O60662 606 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 IGHEP01854 428 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 ALPPP05187 535 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 TUBBP07437 444 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 PKLRP30613 574 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 ADARP55265 1226 aaKnown RBP14.55□□□□□ -0.08
VARS-223ENST00000474643 RAPSNQ13702 412 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 ATP1A4Q13733 1029 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 UBAP2LQ14157 1087 aaKnown RBP14.55□□□□□ -0.08
VARS-223ENST00000474643 TTLL9Q3SXZ7 439 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 ZNF789Q5FWF6 425 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 VRK3Q8IV63 474 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 CPT1CQ8TCG5 803 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 FER1L6-AS2Q96M78 137 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 SPRTNQ9H040 489 aaPredicted RBP14.55□□□□□ -0.08
VARS-223ENST00000474643 FAM60AQ9NP50 221 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 COMMD10Q9Y6G5 202 aa14.55□□□□□ -0.08
VARS-223ENST00000474643 EIF3HO15372 352 aaKnown RBP eCLIP14.54□□□□□ -0.08
VARS-223ENST00000474643 GPC4O75487 556 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 HAUS5O94927 633 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 PIM1P11309 404 aaPredicted RBP14.54□□□□□ -0.08
VARS-223ENST00000474643 MAGP20916 626 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 CD9P21926 228 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 ARSFP54793 590 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 GUCY2DQ02846 1103 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 FASTKD3Q14CZ7 662 aaKnown RBP14.54□□□□□ -0.08
VARS-223ENST00000474643 ZC3H12BQ5HYM0 836 aaKnown RBP14.54□□□□□ -0.08
VARS-223ENST00000474643 IRAK1BP1Q5VVH5 260 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 RHBDD2Q6NTF9 364 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 CNSTQ6PJW8 725 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 HPS6Q86YV9 775 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 ZBTB2Q8N680 514 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 TTC29Q8NA56 475 aaPredicted RBP14.54□□□□□ -0.08
VARS-223ENST00000474643 C2CD4AQ8NCU7 369 aaPredicted RBP14.54□□□□□ -0.08
VARS-223ENST00000474643 MAGEC3Q8TD91 643 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.54□□□□□ -0.08
VARS-223ENST00000474643 MIB2Q96AX9 1013 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 TSPYL1Q9H0U9 437 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 FAM114A2Q9NRY5 505 aa14.54□□□□□ -0.08
VARS-223ENST00000474643 GRHL1Q9NZI5 618 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms