RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 YWHABP31946 246 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 ADD1P35611 737 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 FASLGP48023 281 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ARRB1P49407 418 aaPredicted RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 ADKP55263 362 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 UCP2P55851 309 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 TPTEP56180 551 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ITGA1P56199 1179 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 DAOAP59103 153 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 CNTN2Q02246 1040 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 SEMG2Q02383 582 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 DAG1Q14118 895 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 BOP1Q14137 746 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 GRM2Q14416 872 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 GANABQ14697 944 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 CLEC16AQ2KHT3 1053 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 PHYHD1Q5SRE7 291 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 TCEAL6Q6IPX3 200 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 RGS7BPQ6MZT1 257 aaPredicted RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 CCNI2Q6ZMN8 369 aaPredicted RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 ZBTB49Q6ZSB9 765 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ABHD12BQ7Z5M8 362 aaPredicted RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 CCDC117Q8IWD4 279 aaPredicted RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 NANOGP1Q8N7R0 232 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ACBD4Q8NC06 268 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 LRRC20Q8TCA0 184 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 BRIX1Q8TDN6 353 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 MAFIPQ8WZ33 124 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ESR2Q92731 530 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 WNK4Q96J92 1243 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 MARK4Q96L34 752 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 SERPINB12Q96P63 405 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 PTPN18Q99952 460 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ORAI3Q9BRQ5 295 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 CPEB1Q9BZB8 566 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 WDR11Q9BZH6 1224 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 SLCO5A1Q9H2Y9 848 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ADAMTS10Q9H324 1103 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 KAT8Q9H7Z6 458 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 DDX31Q9H8H2 851 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 ANKZF1Q9H8Y5 726 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ZFP14Q9HCL3 533 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 DUSP22Q9NRW4 184 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 PNO1Q9NRX1 252 aaKnown RBP3.4□□□□□ -1.87
UBR3-208ENST00000474426 ABCC13Q9NSE7 274 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 MTCH1Q9NZJ7 389 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 MAP3K2Q9Y2U5 619 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 TCAF1Q9Y4C2 921 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 ASB1Q9Y576 335 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 UMODL1Q5DID0 1318 aa3.4□□□□□ -1.87
UBR3-208ENST00000474426 A0A1W2PRB8 838 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 C1QTNF9BB2RNN3 333 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 LOC110117498-PIK3R3F6TDL0 507 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 M0R296 226 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MDM4O15151 490 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TBX19O60806 448 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 AVILO75366 819 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PAGE1O75459 146 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ACSL3O95573 720 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NDST3O95803 873 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FAM107AO95990 144 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GSRP00390 522 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 SMIM6P0DI80 62 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MUC1P15941 1255 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 CD27P26842 260 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 CEACAM3P40198 252 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ID1P41134 155 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NAA10P41227 235 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 LIMS1P48059 325 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GPC5P78333 572 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MBTD1Q05BQ5 628 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 BST1Q10588 318 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ILF2Q12905 390 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 SCGB2A2Q13296 93 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TDGQ13569 410 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 IL18Q14116 193 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 MTF1Q14872 753 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NR1I3Q14994 352 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 C5orf64Q2M2E5 130 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ACSBG2Q5FVE4 666 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 PLAC9Q5JTB6 97 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 BROXQ5VW32 411 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NCR3LG1Q68D85 454 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 FRMPD2BQ6IN97 320 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 VTCN1Q7Z7D3 282 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GPR180Q86V85 440 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TDRPQ86YL5 185 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TGIF2LXQ8IUE1 241 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZDHHC21Q8IVQ6 265 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 GCNT2Q8N0V5 402 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ZBTB2Q8N680 514 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 OR2L8Q8NGY9 312 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.39□□□□□ -1.87
UBR3-208ENST00000474426 SETD6Q8TBK2 473 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 ASAP3Q8TDY4 903 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 TCEAL3Q969E4 200 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 WDR77Q9BQA1 342 aaPredicted RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 RBM38Q9H0Z9 239 aaKnown RBP3.39□□□□□ -1.87
UBR3-208ENST00000474426 DNTTIP1Q9H147 329 aa3.39□□□□□ -1.87
UBR3-208ENST00000474426 NXF3Q9H4D5 531 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms