RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SLC5A11Q8WWX8 675 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 NELL1Q92832 810 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 AHCYL2Q96HN2 611 aaKnown RBP9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 IL17FQ96PD4 163 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 SORT1Q99523 831 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 EFCAB11Q9BUY7 163 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 ACAT2Q9BWD1 397 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 TMEM120AQ9BXJ8 343 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC29A3Q9BZD2 475 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 GAREM1Q9H706 876 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 MRGBPQ9NV56 204 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 INTS7Q9NVH2 962 aaKnown RBP9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 PNPOQ9NVS9 261 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 KCNK4Q9NYG8 393 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 TAC3Q9UHF0 121 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 KLF15Q9UIH9 416 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 PNMA8BQ9ULN7 279 aaPredicted RBP9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 NCOR1O75376 2440 aa9.95□□□□□ -0.82
PRPF38A-202ENST00000474048 PIPSLA2A3N6 862 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 KRT87PA6NCN2 255 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 PRR19A6NJB7 356 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 C2orf74A8MZ97 194 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 MATN2O00339 956 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 YY2O15391 372 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SNX3O60493 162 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 VPS4BO75351 444 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 EPN2O95208 641 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 CELA2BP08218 269 aaPredicted RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 EZRP15311 586 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 EPHA8P29322 1005 aaPredicted RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC19A1P41440 591 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 CCR10P46092 362 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 GPR18Q14330 331 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SUZ12Q15022 739 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SF1Q15637 639 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 HLA-BQ31612 363 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 C14orf28Q4W4Y0 310 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 PEAR1Q5VY43 1037 aaPredicted RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 LIPJQ5W064 366 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 CLEC6AQ6EIG7 209 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 LAIR1Q6GTX8 287 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 RASGRP3Q8IV61 690 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 KLHDC8AQ8IYD2 350 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SFRP1Q8N474 314 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 C2orf73Q8N5S3 287 aaPredicted RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 ARL10Q8N8L6 244 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 OR4F6Q8NGB9 312 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 OR4E2Q8NGC2 313 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 OR6Y1Q8NGX8 325 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 TWIST2Q8WVJ9 160 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 PTCD3Q96EY7 689 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SEC16BQ96JE7 1060 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 PPP1R36Q96LQ0 422 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 AIF1LQ9BQI0 150 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 NTMT1Q9BV86 223 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 NUF2Q9BZD4 464 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 ARRDC1-AS1Q9H2J1 176 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 XKR8Q9H6D3 395 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF395Q9H8N7 513 aaPredicted RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SLC40A1Q9NP59 571 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 MRPS30Q9NP92 439 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 TMEM74BQ9NUR3 256 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 NMRK1Q9NWW6 199 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 ZDHHC2Q9UIJ5 367 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 ENTPD2Q9Y5L3 495 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 R4GN57 208 aa9.94□□□□□ -0.82
PRPF38A-202ENST00000474048 TMEM131Q92545 1883 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ZDBF2Q9HCK1 2354 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 A0A1B0GTQ1 180 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 A6NCN8 305 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 E7ENX8 843 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 E7EQ34 232 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 EBAG9O00559 213 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 FFAR3O14843 346 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 GPR42O15529 346 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 RGS14O43566 566 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CCDC22O60826 627 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ULK1O75385 1050 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 EML2O95834 649 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CAPN1P07384 714 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CHRM5P08912 532 aaPredicted RBP9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ERGP11308 486 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 PCNAP12004 261 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 HRH2P25021 359 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 RXRGP48443 463 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CCR8P51685 355 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 STX1BP61266 288 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 SH3BP2P78314 561 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ABATP80404 500 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 TAP2Q03519 686 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 KIR2DS3Q14952 304 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 CPSF6Q16630 551 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 ZNF423Q2M1K9 1284 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 GGTA1PQ4G0N0 100 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 C10orf62Q5T681 223 aaPredicted RBP9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 KANK2Q63ZY3 851 aa9.93□□□□□ -0.82
PRPF38A-202ENST00000474048 GRHL2Q6ISB3 625 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms