RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 LINC01555Q8NAE3 123 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 ACBD4Q8NC06 268 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 STT3BQ8TCJ2 826 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 BRIX1Q8TDN6 353 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 ADAMTS18Q8TE60 1221 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 DENND1AQ8TEH3 1009 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 NANOS1Q8WY41 292 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 HAS2Q92819 552 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 C8orf44Q96CB5 159 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 MTFMTQ96DP5 389 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 C14orf79Q96F83 325 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 VPS50Q96JG6 964 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 DNAJC1Q96KC8 554 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 C19orf43Q9BQ61 176 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 APOL2Q9BQE5 337 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 OCSTAMPQ9BR26 566 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 CRB3Q9BUF7 120 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 MENTQ9BUN1 341 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 NAT10Q9H0A0 1025 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 RNF32Q9H0A6 362 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 PLA2G3Q9NZ20 509 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 PTGFRNQ9P2B2 879 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 SEC14L3Q9UDX4 400 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 POLG2Q9UHN1 485 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 RSPH14Q9UHP6 348 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 SH3BGRL2Q9UJC5 107 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 TINAGQ9UJW2 476 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 CAPN11Q9UMQ6 739 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 KLHL20Q9Y2M5 609 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 TDRKHQ9Y2W6 561 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 MRPS2Q9Y399 296 aaKnown RBP4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 MAU2Q9Y6X3 613 aa4.9□□□□□ -1.63
SNRNP40-204ENST00000474025 JMJD1CQ15652 2540 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ABCA4P78363 2273 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 STAB1Q9NY15 2570 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 IGLV3-12A0A075B6K2 115 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 hCG_1818297A0A087WSY0 165 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 NSG1A0A0A6YYJ2 146 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SLC5A10A0PJK1 596 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SMTNL1A8MU46 457 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 HACD1B0YJ81 288 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ISM1B1AKI9 464 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 H7C0S8 307 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 MAP2K7O14733 419 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CTSVO60911 334 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ANXA9O76027 345 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 AP2A2O94973 939 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 RASAL1O95294 804 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CLDN14O95500 239 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CRTAMO95727 393 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 WDPCPO95876 746 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 F10P00742 488 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SERPINC1P01008 464 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CRYABP02511 175 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SERPINA7P05543 415 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CELA2AP08217 269 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ZGLP1P0C6A0 271 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 PSMB4P28070 264 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 PKLRP30613 574 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 GRIA3P42263 894 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ARHGAP25P42331 645 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 NSG1P42857 185 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CARSP49589 748 aaKnown RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 RAB28P51157 221 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 GEMP55040 296 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 PMP22Q01453 160 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 TLE4Q04727 773 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 RBPJQ06330 500 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CBLBQ13191 982 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 BRD3Q15059 726 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 C3AR1Q16581 482 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ASTE1Q2TB18 679 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 ODF2Q5BJF6 829 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 TCTE1Q5JU00 501 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 KAZNQ674X7 775 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 DENND5AQ6IQ26 1287 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 HIBCHQ6NVY1 386 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 PACS1Q6VY07 963 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 NAPRTQ6XQN6 538 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 RIPOR1Q6ZS17 1223 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 NDUFAF7Q7L592 441 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 TAX1BP1Q86VP1 789 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CEP97Q8IW35 865 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 PRSS58Q8IYP2 241 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 C2orf73Q8N5S3 287 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 LMNTD1Q8N9Z9 388 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 TTC29Q8NA56 475 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 DNAJB8Q8NHS0 232 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SLC35G2Q8TBE7 412 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CCDC110Q8TBZ0 833 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CHTF18Q8WVB6 975 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 P3H4Q92791 437 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 HAUS1Q96CS2 278 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 UCN2Q96RP3 112 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SPOCK3Q9BQ16 436 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 SELENOSQ9BQE4 189 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 C10orf88Q9H8K7 445 aa4.89□□□□□ -1.63
SNRNP40-204ENST00000474025 MCCC2Q9HCC0 563 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms