RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SF1Q15637 639 aaKnown RBP10.65□□□□□ -0.7
C9orf3-214ENST00000473778 ATG9BQ674R7 924 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 C16orf87Q6PH81 154 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 TPGS1Q6ZTW0 290 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 B3GNT8Q7Z7M8 397 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 NPAS4Q8IUM7 802 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 EID3Q8N140 333 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 ARL14EPQ8N8R7 260 aaPredicted RBP10.65□□□□□ -0.7
C9orf3-214ENST00000473778 DDHD1Q8NEL9 900 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 OVCA2Q8WZ82 227 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 UBE2FQ969M7 185 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 FAM120BQ96EK7 910 aaKnown RBP10.65□□□□□ -0.7
C9orf3-214ENST00000473778 HHIPQ96QV1 700 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 NODALQ96S42 347 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 PARVBQ9HBI1 364 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 C3orf18Q9UK00 162 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 MAN2B2Q9Y2E5 1009 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 AGAP14A8MT82 685 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 YY2O15391 372 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 SLC16A6O15403 523 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 NOL3O60936 208 aaKnown RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ADAM23O75077 832 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 WDR47O94967 919 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 CLDN9O95484 217 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 SELPP16109 830 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 LHCGRP22888 699 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ALDH4A1P30038 563 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 MASP1P48740 699 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 CLK3P49761 638 aaKnown RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 AP1S1P61966 158 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 VLDLRP98155 873 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 KCNC4Q03721 635 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 MAD2L1Q13257 205 aaPredicted RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 CYP2A13Q16696 494 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 SMU1Q2TAY7 513 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 PGS1Q32NB8 556 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ATP13A5Q4VNC0 1218 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 TXNDC8Q6A555 127 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 OR4F3Q6IEY1 312 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 DOK6Q6PKX4 331 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 VTCN1Q7Z7D3 282 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 CCDC71Q8IV32 467 aaPredicted RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ADHFE1Q8IWW8 467 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 DCAF4L2Q8NA75 395 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 CHPT1Q8WUD6 406 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 TRUB1Q8WWH5 349 aaKnown RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ITPKCQ96DU7 683 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 PYURFQ96I23 114 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 DPH2Q9BQC3 489 aaPredicted RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 HTATIP2Q9BUP3 242 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 EBPLQ9BY08 206 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 CCDC90BQ9GZT6 254 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 KCNH6Q9H252 994 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 RAD21L1Q9H4I0 556 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 RDH14Q9HBH5 336 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF334Q9HCZ1 680 aaPredicted RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 STARD7Q9NQZ5 370 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ARL15Q9NXU5 204 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 ERVK-18Q9QC07 812 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 INTS6Q9UL03 887 aaKnown RBP10.65□□□□□ -0.71
C9orf3-214ENST00000473778 TMPRSS11EQ9UL52 423 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 VPS4AQ9UN37 437 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 COQ6Q9Y2Z9 468 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 TRIM17Q9Y577 477 aa10.65□□□□□ -0.71
C9orf3-214ENST00000473778 A0A096LPI6 279 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 hCG_2039718K7EN88 272 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 BCKDKO14874 412 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 UGT2B11O75310 529 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ERN1O75460 977 aaKnown RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ABLIM3O94929 683 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 PARNO95453 639 aaKnown RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 OCM2P0CE71 109 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 OCMP0CE72 109 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 EFNA1P20827 205 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 HOXA9P31269 272 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 CTSOP43234 321 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 STK19P49842 368 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 IFITM3Q01628 133 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 BCL2L1Q07817 233 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ELAVL2Q12926 359 aaKnown RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 INAQ16352 499 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ADPRMQ3LIE5 342 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 LHX8Q68G74 356 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 CRTC1Q6UUV9 634 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF783Q6ZMS7 281 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ZDHHC21Q8IVQ6 265 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 BEND7Q8N7W2 519 aaPredicted RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF461Q8TAF7 563 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 NDNFQ8TB73 568 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 SELENOMQ8WWX9 145 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 MAGIXQ9H6Y5 334 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 THG1LQ9NWX6 298 aaKnown RBP10.64□□□□□ -0.71
C9orf3-214ENST00000473778 LRFN2Q9ULH4 789 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 ERGIC3Q9Y282 383 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 PMF1-BGLAPU3KQ54 211 aa10.64□□□□□ -0.71
C9orf3-214ENST00000473778 OXSR1O95747 527 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF682O95780 498 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF12P17014 697 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ITIH1P19827 911 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms