RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 BTN3A3O00478 584 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 CLGNO14967 610 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 BIRC5O15392 142 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 CAPN5O15484 640 aaPredicted RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 DLX3O60479 287 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 TRIM13O60858 407 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 H2AFYO75367 372 aaKnown RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 CEACAM1P13688 526 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 EPB42P16452 691 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 IMPDH1P20839 514 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 CDH3P22223 829 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 HRH2P25021 359 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 EEF1DP29692 281 aaKnown RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 ARL1P40616 181 aaPredicted RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 ARL4DP49703 201 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 ACADVLP49748 655 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 HERVK_113P63132 956 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 ABATP80404 500 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 FASTKQ14296 549 aaKnown RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 PCBP2Q15366 365 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCM2-205ENST00000472223 NKAIN2Q5VXU1 208 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 LIPMQ5VYY2 423 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 WDR74Q6RFH5 385 aaPredicted RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 LCTLQ6UWM7 567 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 USP53Q70EK8 1073 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 GLRX5Q86SX6 157 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 C17orf64Q86WR6 236 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 ADGRF3Q8IZF5 1079 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 TMEM151AQ8N4L1 468 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 CCNYL1Q8N7R7 359 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 RSC1A1Q92681 617 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 ATP6V1E2Q96A05 226 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 PYCR2Q96C36 320 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 TGM7Q96PF1 710 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 MENTQ9BUN1 341 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 ERVK-6Q9BXR3 956 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 C12orf65Q9H3J6 166 aaKnown RBP16.29■□□□□ 0.2
CCM2-205ENST00000472223 OXSMQ9NWU1 459 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 STK38LQ9Y2H1 464 aa16.29■□□□□ 0.2
CCM2-205ENST00000472223 G3V2L1 256 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 TAPBPO15533 448 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 RASSF9O75901 435 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 SUPT7LO94864 414 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 GNAZP19086 355 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 KCNA4P22459 653 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 CD1CP29017 333 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 PRDX3P30048 256 aaKnown RBP16.28■□□□□ 0.2
CCM2-205ENST00000472223 SERPINB4P48594 390 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 DNAJB13P59910 316 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 SQSTM1Q13501 440 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 PDK4Q16654 411 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 SLC5A12Q1EHB4 618 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 TMEM71Q6P5X7 295 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 SPESP1Q6UW49 350 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 CARFQ8N187 725 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 TBC1D19Q8N5T2 526 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 LINC01555Q8NAE3 123 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 UBTD2Q8WUN7 234 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 ACAT2Q9BWD1 397 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 SGPP1Q9BX95 441 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 PRM3Q9NNZ6 103 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 MRPS30Q9NP92 439 aaKnown RBP16.28■□□□□ 0.2
CCM2-205ENST00000472223 GPRC5BQ9NZH0 403 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 EPHA6Q9UF33 1036 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 TAC3Q9UHF0 121 aa16.28■□□□□ 0.2
CCM2-205ENST00000472223 WDR91A4D1P6 747 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 TMX2-CTNND1H3BSU7 103 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 BPGMP07738 259 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 SBK3P0C264 359 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 UGT2B7P16662 529 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 ALDH3A1P30838 453 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 GRK3P35626 688 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 GDF5P43026 501 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 SLC6A12P48065 614 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 NOVA1P51513 510 aaKnown RBP16.27■□□□□ 0.2
CCM2-205ENST00000472223 PRDX1Q06830 199 aaKnown RBP16.27■□□□□ 0.2
CCM2-205ENST00000472223 CDC16Q13042 620 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 GTF2H2Q13888 395 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 ICE2Q659A1 982 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 GTF2H2CQ6P1K8 395 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 KLHDC8AQ8IYD2 350 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 TEX9Q8N6V9 391 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 ESAMQ96AP7 390 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 L3HYPDHQ96EM0 354 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 TMEM79Q9BSE2 394 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 C1GALT1Q9NS00 363 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 INTS9Q9NV88 658 aaKnown RBP16.27■□□□□ 0.2
CCM2-205ENST00000472223 SPHK1Q9NYA1 384 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 AKAP7Q9P0M2 348 aaPredicted RBP16.27■□□□□ 0.2
CCM2-205ENST00000472223 SNX7Q9UNH6 387 aa16.27■□□□□ 0.2
CCM2-205ENST00000472223 UNC13CQ8NB66 2214 aa16.26■□□□□ 0.19
CCM2-205ENST00000472223 A0A0J9YY10 115 aa16.26■□□□□ 0.19
CCM2-205ENST00000472223 TLCD2A6NGC4 264 aa16.26■□□□□ 0.19
CCM2-205ENST00000472223 SIX3O95343 332 aaPredicted RBP16.26■□□□□ 0.19
CCM2-205ENST00000472223 MLYCDO95822 493 aa16.26■□□□□ 0.19
CCM2-205ENST00000472223 NPPBP16860 134 aa16.26■□□□□ 0.19
CCM2-205ENST00000472223 CXCR2P25025 360 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms