RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 FBXO42Q6P3S6 717 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SPRED1Q7Z699 444 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 THOC6Q86W42 341 aaKnown RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 AMIGO1Q86WK6 493 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 L3MBTL4Q8NA19 623 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF740Q8NDX6 193 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 MAPK15Q8TD08 544 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 CCDC74AQ96AQ1 378 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SCYL1Q96KG9 808 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 NTMT1Q9BV86 223 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 EDEM2Q9BV94 578 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SARGQ9BW04 601 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 GTPBP2Q9BX10 602 aaKnown RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SLC32A1Q9H598 525 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 KCNK13Q9HB14 408 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 OR6C2Q9NZP2 312 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 CD274Q9NZQ7 290 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 LRIT1Q9P2V4 623 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 POLG2Q9UHN1 485 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 POMT2Q9UKY4 750 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 KLHL20Q9Y2M5 609 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 TDRKHQ9Y2W6 561 aaKnown RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 FAM221BA6H8Z2 402 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 OR5K3A6NET4 321 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 SYCE1LA8MT33 242 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 TMEM233B4DJY2 109 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 E7EQ34 232 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 K7EPI3 171 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 LCMT2O60294 686 aaKnown RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 CTSVO60911 334 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 STK16O75716 305 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 SERPINE1P05121 402 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 FGF4P08620 206 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 ANXA5P08758 320 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 ATXN8OSP0DMR3 200 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 CYP2A7P20853 494 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 VARSP26640 1264 aaKnown RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 NDUFS1P28331 727 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 GRIA3P42263 894 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 HALP42357 657 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 MAPK9P45984 424 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 HTR6P50406 440 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 GFERP55789 205 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 CSNK1G2P78368 415 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 CLCQ05315 142 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 PRDX1Q06830 199 aaKnown RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 GALNT1Q10472 559 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 TCHHL1Q5QJ38 904 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 KLC3Q6P597 504 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 TTC23LQ6PF05 361 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 LCTLQ6UWM7 567 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 GLRX5Q86SX6 157 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 SLC9B2Q86UD5 537 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 TRIM73Q86UV7 250 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 PAQR7Q86WK9 346 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 DCBLD1Q8N8Z6 715 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 OR2L3Q8NG85 312 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 WDR20Q8TBZ3 569 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 EXT2Q93063 718 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 C11orf24Q96F05 449 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 CDK15Q96Q40 435 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 KCNA7Q96RP8 456 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 NUDT22Q9BRQ3 303 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 ACBD3Q9H3P7 528 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 FAM60AQ9NP50 221 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 INTS9Q9NV88 658 aaKnown RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 ACTR10Q9NZ32 417 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 RNF11Q9Y3C5 154 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 HEBP2Q9Y5Z4 205 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 COLEC10Q9Y6Z7 277 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 CFAP54Q96N23 3096 aa9.53□□□□□ -0.88
SF3A1-207ENST00000471342 MN1Q10571 1320 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-207ENST00000471342 OR2A25A4D2G3 310 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 OR6C74A6NCV1 312 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 C4orf51C9J302 202 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 MED26O95402 600 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 VIPP01282 170 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 PVRP15151 417 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 UGT2B7P16662 529 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TYRP1P17643 537 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 POLR2CP19387 275 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 DRD4P21917 467 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 MPSTP25325 297 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SHMT2P34897 504 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 GPR3P46089 330 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 EPHA4P54764 986 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 ABCE1P61221 599 aaKnown RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 CCL7P80098 99 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 ZFP36L1Q07352 338 aaKnown RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 HYAL2Q12891 473 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TUBB3Q13509 450 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 GTF2H2Q13888 395 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 DOC2AQ14183 400 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 RCN2Q14257 317 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TBCCQ15814 346 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 STPG1Q5TH74 334 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 CDCP2Q5VXM1 449 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms