RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 HMGCLL1Q8TB92 370 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 DLG3Q92796 817 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ZUFSPQ96AP4 578 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 BIRC8Q96P09 236 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 XAB2Q9HCS7 855 aaKnown RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 MLXIPLQ9NP71 852 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 ENAMQ9NRM1 1142 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 TXLNGQ9NUQ3 528 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 G3BP2Q9UN86 482 aaKnown RBP12.99□□□□□ -0.33
HMGN1-211ENST00000471260 PLAAQ9Y263 795 aa12.99□□□□□ -0.33
HMGN1-211ENST00000471260 FAM237BA0A1B0GVD1 139 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 SDR42E2A6NKP2 422 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 TARM1B6A8C7 271 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 PYCARD-AS1I3L0S3 204 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 TMEM63AO94886 807 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 IGHEP01854 428 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 NUDT17P0C025 328 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 FAM153BP0C7A2 387 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 HSD17B3P37058 310 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 COILP38432 576 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 RRADP55042 308 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 GBX1Q14549 363 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 SF1Q15637 639 aaKnown RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 TRIP13Q15645 432 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 PTCHD3Q3KNS1 767 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 FAM153CQ494X1 144 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 CTSL3PQ5NE16 218 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 YOD1Q5VVQ6 348 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 CCDC137Q6PK04 289 aaKnown RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 YTHDF3Q7Z739 585 aaKnown RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 RAB43Q86YS6 212 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 LMNTD2Q8IXW0 634 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 BCAS4Q8TDM0 211 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 NACC2Q96BF6 587 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 ARL8AQ96BM9 186 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 GBP5Q96PP8 586 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 FMO2Q99518 471 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 NDC1Q9BTX1 674 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 TRIM55Q9BYV6 548 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 SPRTNQ9H040 489 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 CNOT10Q9H9A5 744 aaKnown RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 INTS10Q9NVR2 710 aaKnown RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 EURLQ9NYK6 297 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 SAMD15Q9P1V8 674 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 PCYOX1Q9UHG3 505 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 GPN3Q9UHW5 284 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-211ENST00000471260 KLK4Q9Y5K2 254 aa12.98□□□□□ -0.33
HMGN1-211ENST00000471260 ESYT3A0FGR9 886 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 ARGFXA6NJG6 315 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 HCRTR1O43613 425 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 PRICKLE3O43900 615 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CEACAM4O75871 244 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 DNAJB5O75953 348 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 MATN4O95460 622 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CBSLP0DN79 551 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 PIM1P11309 404 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 MAGP20916 626 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 FMO4P31512 558 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CBSP35520 551 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 PTGIRP43119 386 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 FNTAP49354 379 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 VPS41P49754 854 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CCL11P51671 97 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 PGDP52209 483 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 FOXK1P85037 733 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 NAA25Q14CX7 972 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 TCTE1Q5JU00 501 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 NEPROQ6NW34 567 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 TTC27Q6P3X3 843 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CASC4Q6P4E1 433 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 FIGLAQ6QHK4 219 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CES3Q6UWW8 571 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CAND1Q86VP6 1230 aaKnown RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 CILP2Q8IUL8 1156 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 MCATQ8IVS2 390 aaKnown RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 LMNTD1Q8N9Z9 388 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 GRK7Q8WTQ7 553 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 SKA2Q8WVK7 121 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 SLCO2A1Q92959 643 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 DDX47Q9H0S4 455 aaKnown RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 SPATA7Q9P0W8 599 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 IFT80Q9P2H3 777 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-211ENST00000471260 KLHL42Q9P2K6 505 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 NDOR1Q9UHB4 597 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 ZNF451Q9Y4E5 1061 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 NFS1Q9Y697 457 aa12.97□□□□□ -0.33
HMGN1-211ENST00000471260 A0A087WUV0 522 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 K7EM74 188 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 KLHL41O60662 606 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 SRPX2O60687 465 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 AVILO75366 819 aa12.96□□□□□ -0.33
HMGN1-211ENST00000471260 KLF7O75840 302 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-211ENST00000471260 ONECUT2O95948 504 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms