RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 UBOX5O94941 541 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 SIX3O95343 332 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 PCCBP05166 539 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 KITP10721 976 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ERGP11308 486 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 EZRP15311 586 aaKnown RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ITGB6P18564 788 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ACADLP28330 430 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 NDUFS1P28331 727 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ACSL1P33121 698 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 IGFALSP35858 605 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 CASP2P42575 452 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 CTSKP43235 329 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 SCTRP47872 440 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 PFN3P60673 137 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 E2F1Q01094 437 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 CAMK2BQ13554 666 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 FGL2Q14314 439 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 INPP5AQ14642 412 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 MAPRE2Q15555 327 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 GSTA3Q16772 222 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 XKR7Q5GH72 579 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 KIAA0895LQ68EN5 471 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 GOLGA7Q7Z5G4 137 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 SPATA19Q7Z5L4 167 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ABI3BPQ7Z7G0 1075 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 FAM124AQ86V42 546 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 IQCHQ86VS3 1027 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 GALNT13Q8IUC8 556 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 RAB42Q8N4Z0 105 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 L3MBTL4Q8NA19 623 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 TMEM145Q8NBT3 493 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 SKA2Q8WVK7 121 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 DLG3Q92796 817 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 EXT2Q93063 718 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 RAD51AP1Q96B01 352 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 BIRC7Q96CA5 298 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ELF4Q99607 663 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 APOOQ9BUR5 198 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 UNKQ9C0B0 810 aaKnown RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 NMUR2Q9GZQ4 415 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 C1orf21Q9H246 121 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 OR52A5Q9H2C5 316 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 LRMDAQ9H2I8 198 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 MMADHCQ9H3L0 296 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ZNF385DQ9H6B1 395 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ZNF395Q9H8N7 513 aaPredicted RBP8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ERVMER34-1Q9H9K5 563 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 DNAJC11Q9NVH1 559 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 EVA1BQ9NVM1 165 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 NDE1Q9NXR1 346 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 GULP1Q9UBP9 304 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 POLG2Q9UHN1 485 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 ANGPTL3Q9Y5C1 460 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 CAPN7Q9Y6W3 813 aa8.89□□□□□ -0.99
PTPRE-207ENST00000471218 DYTNA2CJ06 578 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ARHGEF33A8MVX0 844 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 UBFD1O14562 309 aaKnown RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ATXN7O15265 892 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 C1orf105O95561 183 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PAK4O96013 591 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 KRT6AP02538 564 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 KRT6BP04259 564 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 SLC35G4P0C7Q5 338 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PRR35P0CG20 571 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 HSD3B1P14060 373 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 HSD3B2P26439 372 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 CD38P28907 300 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 SERPINB1P30740 379 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 HNF4AP41235 474 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 KRT6CP48668 564 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 CCNG1P51959 295 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 BNC1Q01954 994 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 BTKQ06187 659 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ACTN3Q08043 901 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TRAF3Q13114 568 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 MAD2L1Q13257 205 aaPredicted RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PTK2BQ14289 1009 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 SQLEQ14534 574 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 RTP5Q14D33 572 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 RBBP7Q16576 425 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 DNAL1Q4LDG9 190 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 LIPJQ5W064 366 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 CAPRIN2Q6IMN6 1127 aaKnown RBP8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ATG14Q6ZNE5 492 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TRIM46Q7Z4K8 759 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TBC1D21Q8IYX1 336 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ARHGAP24Q8N264 748 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PELI3Q8N2H9 469 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 AVL9Q8NBF6 648 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 PLA2G15Q8NCC3 412 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 OR9A1PQ8NGU1 263 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 OR56A3Q8NH54 315 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 OR5K2Q8NHB8 316 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 HMGCLL1Q8TB92 370 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TRPC4APQ8TEL6 797 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 TWIST2Q8WVJ9 160 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 ZFPM2Q8WW38 1151 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 SLC39A7Q92504 469 aa8.88□□□□□ -0.99
PTPRE-207ENST00000471218 FGF11Q92914 225 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms