RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ERN2Q76MJ5 926 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 NLRP14Q86W24 1093 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 FAM72BQ86X60 149 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SFTPA1Q8IWL2 248 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 KIAA2013Q8IYS2 634 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 MAML2Q8IZL2 1156 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 CACNA2D3Q8IZS8 1091 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 TRIM58Q8NG06 486 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 OLIG1Q8TAK6 271 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 HCAR2Q8TDS4 363 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 PDCD6IPQ8WUM4 868 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 MAIP1Q8WWC4 291 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 NELL1Q92832 810 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF641Q96N77 438 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 GTPBP2Q9BX10 602 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 FSD1LQ9BXM9 530 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ADGRE3Q9BY15 652 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 POLR1EQ9GZS1 481 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SLC32A1Q9H598 525 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SEMA4GQ9NTN9 838 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SEPT10Q9P0V9 454 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 AMACRQ9UHK6 382 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 SLCO3A1Q9UIG8 710 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 INTS6Q9UL03 887 aaKnown RBP6.21□□□□□ -1.42
PTCD3-208ENST00000469585 GUCA1BQ9UMX6 200 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 HEY1Q9Y5J3 304 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 VCANP13611 3396 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 ATG2BQ96BY7 2078 aa6.21□□□□□ -1.42
PTCD3-208ENST00000469585 BCLAF3A2AJT9 711 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 H7C0C1 242 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 AP4M1O00189 453 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ZSCAN9O15535 394 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 KIF5CO60282 957 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 WDR47O94967 919 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 GAS8O95995 478 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 UGT2B4P06133 528 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SERPINF2P08697 491 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF806P0C7X5 589 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 EBLN1P0CF75 366 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 CYP2A6P11509 494 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 TDGF1P13385 188 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 CCNCP24863 283 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 CD27P26842 260 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SERPINF1P36955 418 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 GARSP41250 739 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ATP5OP48047 213 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ARRB1P49407 418 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 CCR5P51681 352 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 INHBCP55103 352 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 DYNLT1P63172 113 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SLC25A11Q02978 314 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 COL10A1Q03692 680 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 DMWDQ09019 674 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 OVGP1Q12889 678 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SRSF5Q13243 272 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 HNRNPDQ14103 355 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 DPYSQ14117 519 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 DPYSL3Q14195 570 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 PRPSAP1Q14558 356 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 POM121L1PQ3SYA9 428 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ITPRIPL1Q6GPH6 555 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 NCEH1Q6PIU2 408 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 RASGRP3Q8IV61 690 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 LRRC8AQ8IWT6 810 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 CCDC13Q8IYE1 715 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 KATNAL2Q8IYT4 538 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF683Q8IZ20 524 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 FSTL5Q8N475 847 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ATG16L2Q8NAA4 619 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SLC16A11Q8NCK7 471 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 EXD1Q8NHP7 514 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 TFB1MQ8WVM0 346 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 GRAMD1AQ96CP6 724 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 EID2BQ96D98 161 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 SERAC1Q96JX3 654 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 LENG8Q96PV6 779 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 PEBP4Q96S96 227 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 NAP1L3Q99457 506 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 PRPF18Q99633 342 aaKnown RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 THAP7Q9BT49 309 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 TRIM7Q9C029 511 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 TMEM9BQ9NQ34 198 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 WSB2Q9NYS7 404 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ALG6Q9Y672 507 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF318Q5VUA4 2279 aa6.2□□□□□ -1.42
PTCD3-208ENST00000469585 CACNA1IQ9P0X4 2223 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 GOLGA6L10A0A0M3HER8 536 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 HACD1B0YJ81 288 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PRAMEF26H0Y7S4 382 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 FPGTO14772 594 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ASNA1O43681 348 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CST8O60676 142 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 SOCS5O75159 536 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 IGLV3-19P01714 112 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ALPPL2P10696 532 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ADRB3P13945 408 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CCNB1P14635 433 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 NDUFB7P17568 137 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms