RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 PPP1R3CQ9UQK1 317 aa2.8□□□□□ -1.96
TPR-204ENST00000469463 PPP2R2CQ9Y2T4 447 aa2.8□□□□□ -1.96
TPR-204ENST00000469463 ANGPTL3Q9Y5C1 460 aa2.8□□□□□ -1.96
TPR-204ENST00000469463 R4GN57 208 aa2.8□□□□□ -1.96
TPR-204ENST00000469463 ZNF541Q9H0D2 1346 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 A0A087X002 238 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 IGKV3D-20A0A0C4DH25 116 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 A0A0J9YWU9 116 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 NEMP2A6NFY4 417 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 TMEM221A6NGB7 291 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 TRIM49P0CI25 452 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 TRIM49CP0CI26 452 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 PRKAR1AP10644 381 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 DPEP1P16444 411 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 RAD52P43351 418 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 MAZP56270 477 aaKnown RBP2.79□□□□□ -1.96
TPR-204ENST00000469463 KLC1Q07866 573 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 AIMP1Q12904 312 aaKnown RBP2.79□□□□□ -1.96
TPR-204ENST00000469463 RASA2Q15283 850 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 TEAD2Q15562 447 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 VWC2Q2TAL6 325 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 HLA-BQ31612 363 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 UGT3A2Q3SY77 523 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 ARMC4Q5T2S8 1044 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 FIP1L1Q6UN15 594 aaKnown RBP2.79□□□□□ -1.96
TPR-204ENST00000469463 PLPPR4Q7Z2D5 763 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 NUDT13Q86X67 352 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 MFN1Q8IWA4 741 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 ZNF611Q8N823 705 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 OR5AP2Q8NGF4 316 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 KCNE4Q8WWG9 221 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 ATL1Q8WXF7 558 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 ZNF689Q96CS4 500 aaPredicted RBP2.79□□□□□ -1.96
TPR-204ENST00000469463 ZNF486Q96H40 463 aaPredicted RBP2.79□□□□□ -1.96
TPR-204ENST00000469463 LINC00479Q96M42 142 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 ZNF558Q96NG5 402 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 NYXQ9GZU5 481 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 GFRA4Q9GZZ7 299 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 ANKEF1Q9NU02 776 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 PRMT7Q9NVM4 692 aaPredicted RBP2.79□□□□□ -1.96
TPR-204ENST00000469463 BARHL2Q9NY43 387 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 IL17BQ9UHF5 180 aa2.79□□□□□ -1.96
TPR-204ENST00000469463 TCRBV21S2A2A0A5A6 115 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 RPS6KA5O75582 802 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 IGHV2-70P01814 119 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 ATP5BP06576 529 aaKnown RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 DANCRP0C864 163 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 NR2F1P10589 423 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 SLC2A2P11168 524 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 MYL6BP14649 208 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 CYP11B2P19099 503 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 CD22P20273 847 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 HSPA4P34932 840 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 OPRL1P41146 370 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 RAB28P51157 221 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 MAT1AQ00266 395 aaKnown RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 NUCB1Q02818 461 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 CAMK2DQ13557 499 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 TNIP1Q15025 636 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 XKR6Q5GH73 641 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 XKR3Q5GH77 459 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 WLSQ5T9L3 541 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 KRT80Q6KB66 452 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 PSRC1Q6PGN9 363 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 BRINP3Q76B58 766 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 BTN2A1Q7KYR7 527 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 G2E3Q7L622 706 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 LSMEM2Q8N112 164 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 ZNF614Q8N883 585 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 OR10Q1Q8NGQ4 319 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 HDAC11Q96DB2 347 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 FAM71F1Q96KD3 344 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 LINC00615Q96LM1 132 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 AGAP3Q96P47 875 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 USP28Q96RU2 1077 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 CPNE1Q99829 537 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 CCDC3Q9BQI4 270 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 PITPNM3Q9BZ71 974 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 TRIM15Q9C019 465 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 ZMYND12Q9H0C1 365 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 SHARPINQ9H0F6 387 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 CPVLQ9H3G5 476 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 ERVMER34-1Q9H9K5 563 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 XAB2Q9HCS7 855 aaKnown RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 ZNF701Q9NV72 531 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 TBC1D7Q9P0N9 293 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.78□□□□□ -1.96
TPR-204ENST00000469463 WDR83OSQ9Y284 106 aa2.78□□□□□ -1.96
TPR-204ENST00000469463 DISP3Q9P2K9 1392 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 CLDN4O14493 209 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 CELF2O95319 508 aaKnown RBP2.77□□□□□ -1.97
TPR-204ENST00000469463 MOCS3O95396 460 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 SEC24AO95486 1093 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 CEBPBP17676 345 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 PTGER4P35408 488 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 LHX1P48742 406 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 DNA2P51530 1060 aa2.77□□□□□ -1.97
TPR-204ENST00000469463 LUMP51884 338 aaPredicted RBP2.77□□□□□ -1.97
TPR-204ENST00000469463 PTPRCAPQ14761 206 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms