RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 KLHDC8AQ8IYD2 350 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 PTGR2Q8N8N7 351 aaPredicted RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 OR4D9Q8NGE8 314 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 TGM7Q96PF1 710 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 FAM111AQ96PZ2 611 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 OR2A14Q96R47 310 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 MIPEPQ99797 713 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 NUDT22Q9BRQ3 303 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 HAUS8Q9BT25 410 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 KCNK9Q9NPC2 374 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 DLL3Q9NYJ7 618 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 ATXN7L1Q9ULK2 861 aaPredicted RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 RP1P56715 2156 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 WDR87Q6ZQQ6 2873 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 TLCD2A6NGC4 264 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 A8MT66 165 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 GIPC1O14908 333 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 TOX3O15405 576 aaPredicted RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 TAPBPO15533 448 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PRICKLE3O43900 615 aaPredicted RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 STK16O75716 305 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 WDR47O94967 919 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PEBP1P30086 187 aaKnown RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 HSPA7P48741 367 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 SLC18A1P54219 525 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 GFERP55789 205 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 ABATP80404 500 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 INSM1Q01101 510 aaPredicted RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 CFHR1Q03591 330 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 SF1Q15637 639 aaKnown RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 SLC5A12Q1EHB4 618 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 ZXDCQ2QGD7 858 aaPredicted RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 DHRS13Q6UX07 377 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 LRRC70Q7Z2Q7 622 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 SLCO6A1Q86UG4 719 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 LMNTD1Q8N9Z9 388 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 ARMC2Q8NEN0 867 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 OR2A1Q8NGT9 310 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 FLVCR1-AS1Q8TAF5 88 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PYCR2Q96C36 320 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PHF21BQ96EK2 531 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 TMEM79Q9BSE2 394 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PITPNM3Q9BZ71 974 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 CD244Q9BZW8 370 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 MED4Q9NPJ6 270 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 INTS7Q9NVH2 962 aaKnown RBP14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PDP2Q9P2J9 529 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 SLC17A7Q9P2U7 560 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 COPG2Q9UBF2 871 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 TAC3Q9UHF0 121 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 PCNX2A6NKB5 2137 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 ASXL3Q9C0F0 2248 aa14.68□□□□□ -0.06
SNIP1-202ENST00000468040 ANKRD12Q6UB98 2062 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 TMEM120BA0PK00 339 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 G3V2L1 256 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 K7EPI3 171 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 CASC3O15234 703 aaKnown RBP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 DLX3O60479 287 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 RASSF9O75901 435 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 HOXB3P14651 431 aaPredicted RBP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 CDH3P22223 829 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 CMPK1P30085 196 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PIK3CGP48736 1102 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PRKAA2P54646 552 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PPP1CAP62136 330 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PRDX1Q06830 199 aaKnown RBP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PUM1Q14671 1186 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PCBP2Q15366 365 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 ICE2Q659A1 982 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 LCTLQ6UWM7 567 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 FAM92BQ6ZTR7 304 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 PRSS42Q7Z5A4 293 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 THOC6Q86W42 341 aaKnown RBP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 OR2L3Q8NG85 312 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 TMEM74Q96NL1 305 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 ACAT2Q9BWD1 397 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 CAPS2Q9BXY5 557 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 C12orf65Q9H3J6 166 aaKnown RBP14.67□□□□□ -0.06
SNIP1-202ENST00000468040 SEMA6CQ9H3T2 930 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 C1GALT1Q9NS00 363 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 ABCF3Q9NUQ8 709 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 NKIRAS1Q9NYS0 192 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 OPTCQ9UBM4 332 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 SLC22A14Q9Y267 594 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 KCNE2Q9Y6J6 123 aa14.67□□□□□ -0.06
SNIP1-202ENST00000468040 A0A0J9YY10 115 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 TMX2-CTNND1H3BSU7 103 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 CCNT2O60583 730 aaKnown RBP14.66□□□□□ -0.06
SNIP1-202ENST00000468040 ANKRD34CP0C6C1 535 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 THRAP10827 490 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 NPPBP16860 134 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 HRH2P25021 359 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 PSMB5P28074 263 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 GDF5P43026 501 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 ETV4P43268 484 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 AGTR2P50052 363 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 HERVK_113P63132 956 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 ASPHQ12797 758 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 TRA2AQ13595 282 aaKnown RBP eCLIP14.66□□□□□ -0.06
SNIP1-202ENST00000468040 PDK4Q16654 411 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms