RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CPN2P22792 545 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 RPL10P27635 214 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 RPL4P36578 427 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 CEP68Q76N32 757 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 VMP1Q96GC9 406 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 ARNT2Q9HBZ2 717 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 OARD1Q9Y530 152 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 LINC00854A0A1B0GVQ3 168 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 RHPN2P1A8MT19 583 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 MTHFD1P11586 935 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 MYCLP1P12525 358 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 BLVRAP53004 296 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 RHDQ02161 417 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 DCST1Q5T197 706 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 GPR107Q5VW38 600 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 OR4F3Q6IEY1 312 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SLC2A7Q6PXP3 512 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SLC38A4Q969I6 547 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 KATNBL1Q9H079 304 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 ZCCHC3Q9NUD5 404 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 OGDHLQ9ULD0 1010 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 CFAP20Q9Y6A4 193 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 H3BNX3 289 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 MPC1LP0DKB6 136 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 ETV4P43268 484 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SUOXP51687 545 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 PGGT1BP53609 377 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 TMEM145Q8NBT3 493 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SLC5A11Q8WWX8 675 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 NT5C3BQ969T7 300 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SLC39A13Q96H72 371 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SLC35G5Q96KT7 338 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 DHRS4Q9BTZ2 278 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 GEMIN8Q9NWZ8 242 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 COL5A3P25940 1745 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 B3GALT2O43825 422 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SNNO75324 88 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 CDH1P12830 882 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 GGT5P36269 586 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 PIK3CBP42338 1070 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 BLMHQ13867 455 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 SPATS1Q496A3 300 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 ST13P5Q8NFI4 369 aaPredicted RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 CCDC106Q9BWC9 280 aa13.44□□□□□ -0.26
BRAT1-203ENST00000467558 THUMPD1Q9NXG2 353 aaKnown RBP13.44□□□□□ -0.26
BRAT1-203ENST00000467558 FAM25AB3EWG3 89 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 FAM25CB3EWG5 89 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 FAM25GB3EWG6 89 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 hCG_2039718K7EN88 272 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 TSPAN6O43657 245 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 KAT7O95251 611 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 DHRS4L1P0CG22 281 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SRCP12931 536 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 TPP2P29144 1249 aaPredicted RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 MPIP34949 423 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 RPS6KA3P51812 740 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 DIO3P55073 304 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SPANXN4Q5MJ08 99 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ARMC4Q5T2S8 1044 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 PRR23CQ6ZRP0 262 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 TRIM74Q86UV6 250 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SLC30A8Q8IWU4 369 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 OR52J3Q8NH60 311 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 GIPC3Q8TF64 312 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 P2RY13Q9BPV8 354 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 FAM120CQ9NX05 1096 aaKnown RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 MAT2BQ9NZL9 334 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SPATA7Q9P0W8 599 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 GIMAP2Q9UG22 337 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ACSL5Q9ULC5 683 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 POLR1DQ9Y2S0 133 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 TTC34A8MYJ7 566 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 BCAS2O75934 225 aaPredicted RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SEC24AO95486 1093 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SPINT3P49223 89 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ZNF730Q6ZMV8 503 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ISCA2Q86U28 154 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 C19orf18Q8NEA5 215 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 KBTBD8Q8NFY9 601 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 SORCS1Q8WY21 1168 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ABCG4Q9H172 646 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 RASSF1Q9NS23 344 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 IL17CQ9P0M4 197 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 DMTF1Q9Y222 760 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 KCNK6Q9Y257 313 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 PRR23D1E9PI22 279 aaPredicted RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 OR6B1O95007 311 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 ANGPTL1O95841 491 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 PAK4O96013 591 aaPredicted RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 KLK1P06870 262 aa13.43□□□□□ -0.26
BRAT1-203ENST00000467558 PRR23D2P0DMB1 279 aaPredicted RBP13.43□□□□□ -0.26
BRAT1-203ENST00000467558 BPIP17213 487 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms