RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SIMC1Q8NDZ2 872 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF700Q9H0M5 742 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 SLC25A51Q9H1U9 297 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 ASB8Q9H765 288 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 DMRT3Q9NQL9 472 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 UBP1Q9NZI7 540 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 OR6C2Q9NZP2 312 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 MKL2Q9ULH7 1088 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 PLAGL1Q9UM63 463 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 ASF1AQ9Y294 204 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 A0A1B0GTH9 108 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 HYKKA2RU49 373 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 A6NNC1 897 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 CFAP99D6REC4 459 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 FFAR3O14843 346 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 TFECO14948 347 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 SMAD7O15105 426 aaKnown RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 GPR42O15529 346 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 CD96P40200 585 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 GRIA3P42263 894 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 KIR2DL3P43628 341 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 NUP107P57740 925 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 VSX2P58304 361 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 NKX6-1P78426 367 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 OC90Q02509 493 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 PPIDQ08752 370 aaKnown RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 AP1B1Q10567 949 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 PMPCAQ10713 525 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 PCBP2Q15366 365 aaKnown RBP eCLIP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 SLC14A2Q15849 920 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 TCP11X2Q5H9J9 407 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 SHEQ5VZ18 495 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 SLC25A41Q8N5S1 370 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 HORMAD2Q8N7B1 307 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 MLKLQ8NB16 471 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 NEK11Q8NG66 645 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 TADA1Q96BN2 335 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 TUBB6Q9BUF5 446 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 SLC6A16Q9GZN6 736 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 VPS37BQ9H9H4 285 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 INTS7Q9NVH2 962 aaKnown RBP9.71□□□□□ -0.86
HDAC3-203ENST00000467533 C14orf105Q9NVL8 296 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 HACD3Q9P035 362 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 TRPC4Q9UBN4 977 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 CRLS1Q9UJA2 301 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 FAM169AQ9Y6X4 670 aa9.71□□□□□ -0.86
HDAC3-203ENST00000467533 IGLV3-12A0A075B6K2 115 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 LOC102723996A0A087X1L8 192 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 FITM1A5D6W6 292 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 H7C1Q1 480 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 STX7O15400 261 aaKnown RBP9.7□□□□□ -0.86
HDAC3-203ENST00000467533 KDM1AO60341 852 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 SEC24DO94855 1032 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-203ENST00000467533 SUN1O94901 812 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 MED26O95402 600 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 TPM2P07951 284 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 SP1P08047 785 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 FERP16591 822 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 EEF1GP26641 437 aaKnown RBP9.7□□□□□ -0.86
HDAC3-203ENST00000467533 CHRNA4P43681 627 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 DCAF7P61962 342 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 SLC10A2Q12908 348 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-203ENST00000467533 RPA4Q13156 261 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 PIGHQ14442 188 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-203ENST00000467533 PTPRCAPQ14761 206 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 MAPKAPK3Q16644 382 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 MEP1AQ16819 746 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 BTBD16Q32M84 506 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 SIRPB2Q5JXA9 342 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 RNFT1Q5M7Z0 435 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 SLC25A25Q6KCM7 469 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 UNC5DQ6UXZ4 953 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 ACAD11Q709F0 780 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 TAX1BP1Q86VP1 789 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 CRLF3Q8IUI8 442 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 ARMC2Q8NEN0 867 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 OR5M3Q8NGP4 307 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 OR10Q1Q8NGQ4 319 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 IMMP1LQ96LU5 166 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 ZNF670Q9BS34 389 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 KCNK13Q9HB14 408 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 CRIM1Q9NZV1 1036 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 POLG2Q9UHN1 485 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 HRH3Q9Y5N1 445 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 ALG6Q9Y672 507 aa9.7□□□□□ -0.86
HDAC3-203ENST00000467533 A0A0A6YYK5 440 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 GABRR3A8MPY1 467 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 DDX3XO00571 662 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 PRPF4O43172 522 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 PRMT3O60678 531 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 SRP72O76094 671 aaKnown RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 FTLP02792 175 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 CCDC172P0C7W6 258 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 ERVK-10P10266 1014 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 ATP1B2P14415 290 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 HIVEP2P31629 2446 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 TAZQ16635 292 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 Q5PR19 223 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms