RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 FAM155BO75949 473 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ZNF806P0C7X5 589 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 NMBRP28336 390 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 JAG1P78504 1218 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ARHGAP8P85298 464 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 PRKCDQ05655 676 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 TARDBPQ13148 414 aaKnown RBP eCLIP8.52□□□□□ -1.05
HPS4-209ENST00000466781 LRRTM4Q86VH4 590 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ZNF280BQ86YH2 543 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ZNF611Q8N823 705 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 FAM47BQ8NA70 645 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 SPATA22Q8NHS9 363 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 SEC61A2Q9H9S3 476 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 STXBP5LQ9Y2K9 1186 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 TRIM64BA6NI03 449 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 CXCR6O00574 342 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 IRAK2O43187 625 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ANGPTL1O95841 491 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 POU2F1P14859 743 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 CD47Q08722 323 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 KLF10Q13118 480 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 FBXO48Q5FWF7 155 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 MBLAC2Q68D91 279 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 NXPE1Q8N323 547 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 CYB5D2Q8WUJ1 264 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 SLC2A4RGQ9NR83 387 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 SAGE1Q9NXZ1 904 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 TVP23BQ9NYZ1 205 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 P2RX2Q9UBL9 471 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ARL5AQ9Y689 179 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 DGKBQ9Y6T7 804 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 A6NCN8 305 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 FGF18O76093 207 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ARRB1P49407 418 aaPredicted RBP8.52□□□□□ -1.05
HPS4-209ENST00000466781 TYSND1Q2T9J0 566 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 PRAMEF14Q5SWL7 426 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 PRAMEF17Q5VTA0 474 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 PRAMEF13Q5VWM6 474 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 SLC25A25Q6KCM7 469 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 CLIP4Q8N3C7 705 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ZNF565Q8N9K5 539 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 OR5M3Q8NGP4 307 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 BORCS8Q96FH0 119 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 PIWIL1Q96J94 861 aaKnown RBP8.52□□□□□ -1.05
HPS4-209ENST00000466781 C8orf48Q96LL4 319 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 ADAD1Q96M93 576 aaKnown RBP8.52□□□□□ -1.05
HPS4-209ENST00000466781 SCGB3A2Q96PL1 93 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 TBX5Q99593 518 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 RAD9AQ99638 391 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 CCM2Q9BSQ5 444 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 DUSP26Q9BV47 211 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 FBXW11Q9UKB1 542 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 MYH2Q9UKX2 1941 aa8.52□□□□□ -1.05
HPS4-209ENST00000466781 A8MUI8 341 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 SCGB1D2O95969 90 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 NR4A1P22736 598 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 EDNRAP25101 427 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 VIPR1P32241 457 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 DRG2P55039 364 aaKnown RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 RPS14P62263 151 aaKnown RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 GPR68Q15743 365 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 LRRC70Q7Z2Q7 622 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 KLHL36Q8N4N3 616 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 AGAP11Q8TF27 550 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 CLPTM1LQ96KA5 538 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 ACSS2Q9NR19 701 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 RDH8Q9NYR8 311 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 ZNF221Q9UK13 617 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 SPEF1Q9Y4P9 236 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 PRAMEF33A0A0G2JMD5 474 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 A0A1W2PRB8 838 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 RCCD1A6NED2 376 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 CCL22O00626 93 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 PRAMEF10O60809 474 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 NUDT17P0C025 328 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 CCNOP22674 350 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 LMO2P25791 158 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 ZNF234Q14588 700 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 TNFAIP8L2Q6P589 184 aaPredicted RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 ZNF676Q8N7Q3 588 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 DCBLD1Q8N8Z6 715 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 MAPK15Q8TD08 544 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 HPS1Q92902 700 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 CAMK1GQ96NX5 476 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 ZSCAN5AQ9BUG6 496 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 TMLHEQ9NVH6 421 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 C14orf105Q9NVL8 296 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 WRAP73Q9P2S5 460 aaPredicted RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 SERTAD3Q9UJW9 196 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 AK5Q9Y6K8 562 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 BAZ2BQ9UIF8 2168 aaKnown RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 CCDC88AQ3V6T2 1871 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 H0YJX3 145 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 PIP5K1BO14986 540 aa8.51□□□□□ -1.05
HPS4-209ENST00000466781 DUSP3P51452 185 aaPredicted RBP8.51□□□□□ -1.05
HPS4-209ENST00000466781 AKR1D1P51857 326 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms