RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TRIM16O95361 564 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 GJA8P48165 433 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 NKX2-5P52952 324 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 CLDN8P56748 225 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 IFITM2Q01629 132 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 CACNG1Q06432 222 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 KIAA1614Q5VZ46 1190 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 DOK6Q6PKX4 331 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 MBOAT1Q6ZNC8 495 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 Q8N9G6 341 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 DNAJB8Q8NHS0 232 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 DNASE1L2Q92874 299 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 CEP295NLQ96MC4 621 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 HOXD1Q9GZZ0 328 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 MMP27Q9H306 513 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 TRPS1Q9UHF7 1281 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 PRSS21Q9Y6M0 314 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 E9PQ18 207 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 NUAK1O60285 661 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 RFPL2O75678 378 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 MAGEA11P43364 429 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 PPP3CCP48454 512 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 ARHGDIAP52565 204 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 RPP38P78345 283 aaKnown RBP12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 CLDN19Q8N6F1 224 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 POC5Q8NA72 575 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 TSSK3Q96PN8 268 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 PITX2Q99697 317 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 ADGRE3Q9BY15 652 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 ITPAQ9BY32 194 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 CRISPLD1Q9H336 500 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 AASDHPPTQ9NRN7 309 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 NOD1Q9Y239 953 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 PCDHB1Q9Y5F3 818 aa12.65□□□□□ -0.38
PDZRN3-205ENST00000466780 SCN10AQ9Y5Y9 1956 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 CBX4O00257 560 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 SNPHO15079 494 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 EBLN1P0CF75 366 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 UGT2B10P36537 528 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 CLK1P49759 484 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 SGSHP51688 502 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 ZNF181Q2M3W8 571 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 ZNF598Q86UK7 904 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 ENTHD1Q8IYW4 607 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 IPCEF1Q8WWN9 437 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 POP5Q969H6 163 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 CLSTN3Q9BQT9 956 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 PARVBQ9HBI1 364 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 UGT2A1Q9Y4X1 527 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 PSMD11O00231 422 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 TAF4O00268 1085 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 DSCR3O14972 297 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 AIREO43918 545 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 ACSL4O60488 711 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 PGLSO95336 258 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 MAGP20916 626 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 GADD45AP24522 165 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 GTF2E2P29084 291 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 C21orf33P30042 268 aaPredicted RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 GRK5P34947 590 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 BMPR1AP36894 532 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 NR4A2P43354 598 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 SERPINA9Q86WD7 417 aa12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 UPF1Q92900 1129 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 SAMHD1Q9Y3Z3 626 aaKnown RBP12.64□□□□□ -0.39
PDZRN3-205ENST00000466780 BRCA2P51587 3418 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 GAPDHSO14556 408 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 LRATO95237 230 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 DLGAP3O95886 979 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CD160O95971 181 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 PDYNP01213 254 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 EIF2S1P05198 315 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 FABP3P05413 133 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 BMP1P13497 986 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 EPORP19235 508 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CDH4P55283 916 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TUBA1BP68363 451 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 NPRL3Q12980 569 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 CPSF6Q16630 551 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TTLL9Q3SXZ7 439 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 ZCCHC8Q6NZY4 707 aaKnown RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 FAHD1Q6P587 224 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 LINGO4Q6UY18 593 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 Q6ZPB1 254 aaPredicted RBP12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TUBA1AQ71U36 451 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 SAPCD2Q86UD0 394 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 ATG16L2Q8NAA4 619 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 TRPV1Q8NER1 839 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 UBTD2Q8WUN7 234 aa12.63□□□□□ -0.39
PDZRN3-205ENST00000466780 ULK4Q96C45 1275 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms