RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SPDYCQ5MJ68 293 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 DCAF10Q5QP82 559 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 TXNRD3NBQ6F5E7 133 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 OTOAQ7RTW8 1153 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 CCDC91Q7Z6B0 441 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 HOOK3Q86VS8 718 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 AMIGO1Q86WK6 493 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 LGI2Q8N0V4 545 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 NUP93Q8N1F7 819 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 MAPKAPK5-AS1Q8N8E1 139 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 OR52N5Q8NH56 324 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 FIBINQ8TAL6 211 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLC26A7Q8TE54 656 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 GRK7Q8WTQ7 553 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 PGM2Q96G03 612 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 NSL1Q96IY1 281 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 FAM20AQ96MK3 541 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 FUT8Q9BYC5 575 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLC2A11Q9BYW1 496 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 LAT2Q9GZY6 243 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZMYND12Q9H0C1 365 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 SNX25Q9H3E2 840 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ACTL8Q9H568 366 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 TMEM206Q9H813 350 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 MINDY3Q9H8M7 445 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF556Q9HAH1 456 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 FLRT3Q9NZU0 649 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 TMED3Q9Y3Q3 217 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 TNFRSF18Q9Y5U5 241 aa4.02□□□□□ -1.77
CDC42BPA-211ENST00000466538 IL16Q14005 1332 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 FAM172BPA6NC97 362 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF263O14978 683 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 FGF17O60258 216 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 GSRP00390 522 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 CRYAAP02489 173 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 OAS2P29728 719 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 DCTP40126 519 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 GSDMDP57764 484 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 ERVFC1-1P60608 527 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 SULT2A1Q06520 285 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 CCDC6Q16204 474 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF789Q5FWF6 425 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 C20orf194Q5TEA3 1177 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 CASC4Q6P4E1 433 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 GBP6Q6ZN66 633 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 TMEM182Q6ZP80 229 aaPredicted RBP4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 ANO5Q75V66 913 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF771Q7L3S4 317 aaPredicted RBP4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 DNAJC22Q8N4W6 341 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 C9orf106Q8NAJ2 232 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 CTCFLQ8NI51 663 aaPredicted RBP4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 SEPT1Q8WYJ6 367 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 P2RX5Q93086 422 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 RHNO1Q9BSD3 238 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 URM1Q9BTM9 101 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 PITPNM3Q9BZ71 974 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 CPVLQ9H3G5 476 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 TLE6Q9H808 572 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 IL1RAPL2Q9NP60 686 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZFP57Q9NU63 452 aa4.01□□□□□ -1.77
CDC42BPA-211ENST00000466538 IGSF1Q8N6C5 1336 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 IGLV9-49A0A0B4J1Y8 123 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 A4D1N5 150 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLC33A1O00400 549 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-211ENST00000466538 ATP6V0E1O15342 81 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 FLRT2O43155 660 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 FMO6PO60774 539 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 BAG2O95816 211 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 CDH3P22223 829 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 MARK3P27448 753 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 CSTF2P33240 577 aaKnown RBP eCLIP4□□□□□ -1.77
CDC42BPA-211ENST00000466538 GLIPR1P48060 266 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 SNU13P55769 128 aaKnown RBP4□□□□□ -1.77
CDC42BPA-211ENST00000466538 B3GALT5-AS1P59052 145 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 CACNG1Q06432 222 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 TAF10Q12962 218 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 NFE2L1Q14494 772 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 RBBP7Q16576 425 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 CTU2Q2VPK5 515 aaKnown RBP4□□□□□ -1.77
CDC42BPA-211ENST00000466538 FUT11Q495W5 492 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLC35D3Q5M8T2 416 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 OR4A47Q6IF82 309 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 TUSC5Q8IXB3 177 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 MMD2Q8IY49 270 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 CDK20Q8IZL9 346 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 EID3Q8N140 333 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 KBTBD3Q8NAB2 608 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 MSANTD4Q8NCY6 345 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 KLHDC9Q8NEP7 349 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 OR7G3Q8NG95 312 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 OR11H4Q8NGC9 324 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 PIGBQ92521 554 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 RIT1Q92963 219 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 ST6GALNAC6Q969X2 333 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 EXOC4Q96A65 974 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 BSCL2Q96G97 398 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-211ENST00000466538 AK8Q96MA6 479 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 UTP14AQ9BVJ6 771 aaKnown RBP4□□□□□ -1.77
CDC42BPA-211ENST00000466538 TUFT1Q9NNX1 390 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms