RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CNKSR3Q6P9H4 555 aa15.9■□□□□ 0.14
SLX4-202ENST00000466154 CCDC81Q6ZN84 652 aa15.9■□□□□ 0.14
SLX4-202ENST00000466154 DDX53Q86TM3 631 aaKnown RBP15.9■□□□□ 0.14
SLX4-202ENST00000466154 KREMEN2Q8NCW0 462 aa15.9■□□□□ 0.14
SLX4-202ENST00000466154 BARD1Q99728 777 aaKnown RBP15.9■□□□□ 0.14
SLX4-202ENST00000466154 FAM83DQ9H4H8 585 aa15.9■□□□□ 0.14
SLX4-202ENST00000466154 BAG5Q9UL15 447 aa15.9■□□□□ 0.14
SLX4-202ENST00000466154 SAP18O00422 153 aaKnown RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 FPGTO14772 594 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 TYRP14679 529 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 KIR3DL1P43629 444 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 NUP107P57740 925 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 LSM3P62310 102 aaKnown RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 NTHL1P78549 312 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 TEAD2Q15562 447 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 ANKDD1AQ495B1 522 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 PLPP4Q5VZY2 271 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 FRG2Q64ET8 278 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 NOXRED1Q6NXP6 359 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 GDPD4Q6W3E5 623 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 ZDHHC21Q8IVQ6 265 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 C2orf73Q8N5S3 287 aaPredicted RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 USP7Q93009 1102 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 FRG2BQ96QU4 278 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 TDRKHQ9Y2W6 561 aaKnown RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 ANAPC1Q9H1A4 1944 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 E7EQ34 232 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 GRM6O15303 877 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 PABPC1P11940 636 aaKnown RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 LAG3P18627 525 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 ZC3H7AQ8IWR0 971 aaKnown RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 ADHFE1Q8IWW8 467 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 HERC2P3Q9BVR0 1158 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 PLXNA4Q9HCM2 1894 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 XYLBO75191 536 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 LATS1O95835 1130 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 EFEMP2O95967 443 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 ENGP17813 658 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 LY6G5CQ5SRR4 150 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 BROXQ5VW32 411 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 ASB11Q8WXH4 323 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 SNX19Q92543 992 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 GORASP2Q9H8Y8 452 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 TUBA8Q9NY65 449 aaPredicted RBP15.89■□□□□ 0.13
SLX4-202ENST00000466154 SH3BP4Q9P0V3 963 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 COQ6Q9Y2Z9 468 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 HCFC2Q9Y5Z7 792 aa15.89■□□□□ 0.13
SLX4-202ENST00000466154 RANBP2P49792 3224 aaKnown RBP15.88■□□□□ 0.13
SLX4-202ENST00000466154 GNG14A0A1W2PPG7 69 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 CFAP99D6REC4 459 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 TSPAN6O43657 245 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 MRPL19P49406 292 aaKnown RBP15.88■□□□□ 0.13
SLX4-202ENST00000466154 RBM23Q86U06 439 aaKnown RBP15.88■□□□□ 0.13
SLX4-202ENST00000466154 SH3KBP1Q96B97 665 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 SLC12A9Q9BXP2 914 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 ABCG2Q9UNQ0 655 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 SCELO95171 688 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 CCL5P13501 91 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 FMO3P31513 532 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 DCTP40126 519 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 HLCSP50747 726 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 CLDN8P56748 225 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 ACSM2AQ08AH3 577 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 ACOX1Q15067 660 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 HKDC1Q2TB90 917 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 TTC23Q5W5X9 447 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 ACSM2BQ68CK6 577 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 CACUL1Q86Y37 369 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 ARL10Q8N8L6 244 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 LHPPQ9H008 270 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 RDH14Q9HBH5 336 aa15.88■□□□□ 0.13
SLX4-202ENST00000466154 DCAF13Q9NV06 445 aaKnown RBP15.88■□□□□ 0.13
SLX4-202ENST00000466154 CLIC1O00299 241 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 KPNA3O00505 521 aaPredicted RBP15.87■□□□□ 0.13
SLX4-202ENST00000466154 OLFM2O95897 454 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 ITGB8P26012 769 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 CD47Q08722 323 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 DGCR6Q14129 220 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 CTU2Q2VPK5 515 aaKnown RBP15.87■□□□□ 0.13
SLX4-202ENST00000466154 FAM180BQ6P0A1 224 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 RAVER1Q8IY67 606 aaKnown RBP15.87■□□□□ 0.13
SLX4-202ENST00000466154 AADATQ8N5Z0 425 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 MAL2Q969L2 176 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 TMEM159Q96B96 161 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 SLC29A3Q9BZD2 475 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 ZDHHC4Q9NPG8 344 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 SERHLQ9NQF3 203 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 RASSF1Q9NS23 344 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 VNN3Q9NY84 501 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 KIF17Q9P2E2 1029 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 A0A0J9YVX5 310 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 LOC100130705A0A1B0GUX0 176 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 J3QRK9 145 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 ALDH4A1P30038 563 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 CTSCP53634 463 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 STARD3Q14849 445 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 PRR23BQ6ZRT6 265 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 CBARPQ8N350 705 aaPredicted RBP15.87■□□□□ 0.13
SLX4-202ENST00000466154 OR2A12Q8NGT7 310 aa15.87■□□□□ 0.13
SLX4-202ENST00000466154 FAM81AQ8TBF8 368 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms