RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 SRP54P61011 504 aaKnown RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 CTBSQ01459 385 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 SF3A3Q12874 501 aaKnown RBP eCLIP8.55□□□□□ -1.042e-6■□□□□ 9.1
UBA3-208ENST00000465627 SRSF5Q13243 272 aaKnown RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 LRP8Q14114 963 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 CLCA4Q14CN2 919 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 PTCHD3Q3KNS1 767 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 GALNTL6Q49A17 601 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 CFAP157Q5JU67 520 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 LETMD1Q6P1Q0 360 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 ENPP7Q6UWV6 458 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 SLC36A4Q6YBV0 504 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 CHST15Q7LFX5 561 aaPredicted RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 LRRC70Q7Z2Q7 622 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 RAB44Q7Z6P3 723 aaPredicted RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 SPATS2Q86XZ4 545 aaKnown RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 RGL4Q8IZJ4 473 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 MFSD2AQ8NA29 543 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 OR52B6Q8NGF0 335 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 OR5K2Q8NHB8 316 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 MCOLN3Q8TDD5 553 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 GPBAR1Q8TDU6 330 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 TRPC4APQ8TEL6 797 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 PPP4R1Q8TF05 950 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 ZNF480Q8WV37 535 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 CCT6BQ92526 530 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 TFGQ92734 400 aaPredicted RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 TSACCQ96A04 125 aaPredicted RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 CCDC138Q96M89 665 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 OR4K3Q96R72 315 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 HGH1Q9BTY7 390 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 NTMT1Q9BV86 223 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 SHCBP1LQ9BZQ2 653 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 WWP1Q9H0M0 922 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 TUBB1Q9H4B7 451 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 SLC32A1Q9H598 525 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 ZNF385DQ9H6B1 395 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 CARS2Q9HA77 564 aaKnown RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 MEAF6Q9HAF1 191 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 INTS7Q9NVH2 962 aaKnown RBP8.55□□□□□ -1.04
UBA3-208ENST00000465627 ARL15Q9NXU5 204 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 VTI1BQ9UEU0 232 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 DCTN4Q9UJW0 460 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 KCNK6Q9Y257 313 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 INVSQ9Y283 1065 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 MSRB2Q9Y3D2 182 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 TRAF6Q9Y4K3 522 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 DNAJC15Q9Y5T4 150 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 COL6A6A6NMZ7 2263 aa8.55□□□□□ -1.04
UBA3-208ENST00000465627 ARHGEF17Q96PE2 2063 aaPredicted RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 PCNX2A6NKB5 2137 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 E7ENX8 843 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 SLCO1B7G3V0H7 640 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 SIAH2O43255 324 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 STK16O75716 305 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 THEGLP0DJG4 465 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 KITP10721 976 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 HTR1BP28222 390 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 ARFIP2P53365 341 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 TAP2Q03519 686 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 BTKQ06187 659 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 GTF2H2Q13888 395 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 ZSCAN26Q16670 478 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 CYP2A13Q16696 494 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 UAP1L1Q3KQV9 507 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 GGTA1PQ4G0N0 100 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 SLC9B1Q4ZJI4 515 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 USP39Q53GS9 565 aaKnown RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 SH2D4BQ5SQS7 431 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 VWA5B1Q5TIE3 1220 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 GTF2H2CQ6P1K8 395 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 AGTRAPQ6RW13 159 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 DCP2Q8IU60 420 aaKnown RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 DCUN1D3Q8IWE4 304 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 KIRREL3Q8IZU9 778 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 CLYBLQ8N0X4 340 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 CHCHD4Q8N4Q1 142 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 FITM2Q8N6M3 262 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 L3MBTL4Q8NA19 623 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 OR5AR1Q8NGP9 310 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 OR9A1PQ8NGU1 263 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 CCL4L1Q8NHW4 92 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 HMGCLL1Q8TB92 370 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 PRR11Q96HE9 360 aaPredicted RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 OR52B2Q96RD2 323 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 KCNA7Q96RP8 456 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 UBL7Q96S82 380 aaPredicted RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 NRTNQ99748 197 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 PLCD4Q9BRC7 762 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 TRIM54Q9BYV2 358 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 TMEM168Q9H0V1 697 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 TCEAL2Q9H3H9 227 aaPredicted RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 SMOC1Q9H4F8 434 aa8.54□□□□□ -1.04
UBA3-208ENST00000465627 NOL11Q9H8H0 719 aaKnown RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 EML4Q9HC35 981 aaKnown RBP8.54□□□□□ -1.04
UBA3-208ENST00000465627 TM9SF3Q9HD45 589 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms