RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SYTL1Q8IYJ3 562 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 PPFIBP2Q8ND30 876 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 OR8K5Q8NH50 307 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 UHMK1Q8TAS1 419 aaKnown RBP19.57■□□□□ 0.72
SKA3-205ENST00000465471 MRRFQ96E11 262 aaKnown RBP19.57■□□□□ 0.72
SKA3-205ENST00000465471 FCRL4Q96PJ5 515 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 SSUH2Q9Y2M2 353 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 TMEM184BQ9Y519 407 aaPredicted RBP19.57■□□□□ 0.72
SKA3-205ENST00000465471 DLGAP3O95886 979 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 ALDOAP04075 364 aaKnown RBP19.56■□□□□ 0.72
SKA3-205ENST00000465471 INHBAP08476 426 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 CCDC166P0CW27 439 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 CD1DP15813 335 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 GCAP28676 217 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 SLC26A3P40879 764 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 MAGEA12P43365 314 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 SERPINB9P50453 376 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 CDKL1Q00532 357 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 SLC29A2Q14542 456 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 TSNQ15631 228 aaKnown RBP19.56■□□□□ 0.72
SKA3-205ENST00000465471 UAP1Q16222 522 aaPredicted RBP19.56■□□□□ 0.72
SKA3-205ENST00000465471 ST3GAL2Q16842 350 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 FCRL6Q6DN72 434 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 CCDC91Q7Z6B0 441 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 ADAMTSL2Q86TH1 951 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 ZFAND4Q86XD8 727 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 PPP1R3BQ86XI6 285 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 FBXL8Q96CD0 374 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 SNX15Q9NRS6 342 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 FETUBQ9UGM5 382 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 RARRES3Q9UL19 164 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 OARD1Q9Y530 152 aa19.56■□□□□ 0.72
SKA3-205ENST00000465471 EXOC1LA0A1B0GW35 172 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 SRRM3A6NNA2 597 aaPredicted RBP19.55■□□□□ 0.72
SKA3-205ENST00000465471 TARM1B6A8C7 271 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 H3BMH7 237 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 STMND1H3BQB6 276 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 HCRTR1O43613 425 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 TIAF1O95411 115 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 HIST1H2AGP0C0S8 130 aaPredicted RBP19.55■□□□□ 0.72
SKA3-205ENST00000465471 LIPCP11150 499 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 HIST1H2ADP20671 130 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 RPA3P35244 121 aaPredicted RBP19.55■□□□□ 0.72
SKA3-205ENST00000465471 GMPRP36959 345 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 GRIA3P42263 894 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 ATP6V0D1P61421 351 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 TBPL1P62380 186 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 YBX1P67809 324 aaKnown RBP19.55■□□□□ 0.72
SKA3-205ENST00000465471 DLG1Q12959 904 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 FIGLAQ6QHK4 219 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 AGTRAPQ6RW13 159 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 DNAJC22Q8N4W6 341 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 ZUFSPQ96AP4 578 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 HIST1H2AHQ96KK5 128 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 MIPEPQ99797 713 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 HIST1H2AJQ99878 128 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 H2AFJQ9BTM1 129 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 SGPP1Q9BX95 441 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 TRIM54Q9BYV2 358 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 INTS7Q9NVH2 962 aaKnown RBP19.55■□□□□ 0.72
SKA3-205ENST00000465471 ARL15Q9NXU5 204 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 CTNNAL1Q9UBT7 734 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 TAC3Q9UHF0 121 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 PILRAQ9UKJ1 303 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 KLHL20Q9Y2M5 609 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 HEATR5BQ9P2D3 2071 aa19.55■□□□□ 0.72
SKA3-205ENST00000465471 PKD1L2Q7Z442 2459 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 IGKV1-8A0A0C4DH67 115 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 MAP3K7O43318 606 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 ZNF28P17035 718 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 CNTFP26441 200 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 MSH2P43246 934 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 SERPINB8P50452 374 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 PRDX1Q06830 199 aaKnown RBP19.54■□□□□ 0.72
SKA3-205ENST00000465471 CLN3Q13286 438 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 NAA25Q14CX7 972 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 ICE2Q659A1 982 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 PWWP2BQ6NUJ5 590 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 CENPLQ8N0S6 344 aaPredicted RBP19.54■□□□□ 0.72
SKA3-205ENST00000465471 SPATA6LQ8N4H0 392 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 OR56A3Q8NH54 315 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 OR1L3Q8NH93 324 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 KCNE4Q8WWG9 221 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 PTERQ96BW5 349 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 DPH1Q9BZG8 443 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 SLC6A20Q9NP91 592 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 CCDC177Q9NQR7 707 aaPredicted RBP19.54■□□□□ 0.72
SKA3-205ENST00000465471 ENAMQ9NRM1 1142 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 IGSF5Q9NSI5 407 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 ANKMY1Q9P2S6 941 aa19.54■□□□□ 0.72
SKA3-205ENST00000465471 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.54■□□□□ 0.72
SKA3-205ENST00000465471 V9GYY5 206 aaPredicted RBP19.54■□□□□ 0.72
SKA3-205ENST00000465471 A0A087X1B8 175 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 OR2A25A4D2G3 310 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 TMEM150CB9EJG8 249 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 POC1B-GALNT4F8VUJ3 575 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 STK17BO94768 372 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 C2P06681 752 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 SPTBP11277 2137 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 CCND1P24385 295 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms