RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RAD51AP1Q96B01 352 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 CAMK1GQ96NX5 476 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 PKP4Q99569 1192 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 EDEM2Q9BV94 578 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 TCF7L2Q9NQB0 619 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ZDHHC2Q9UIJ5 367 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 PCDHGB2Q9Y5G2 931 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ASCC3Q8N3C0 2202 aaKnown RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 GUCA1CO95843 209 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 VIPP01282 170 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ENO1P06733 434 aaKnown RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 HIST1H2AGP0C0S8 130 aaPredicted RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ALPPL2P10696 532 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 HIST1H2ADP20671 130 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 NDUFS1P28331 727 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ADSLP30566 484 aaPredicted RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 NAA20P61599 178 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 SUZ12Q15022 739 aaKnown RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 C14orf28Q4W4Y0 310 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC9B1Q4ZJI4 515 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ZCCHC8Q6NZY4 707 aaKnown RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 TTC23LQ6PF05 361 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 MBOAT1Q6ZNC8 495 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 PRR23CQ6ZRP0 262 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 FRMD7Q6ZUT3 714 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 FRA10AC1Q70Z53 315 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ASCL5Q7RTU5 278 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC9B2Q86UD5 537 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 TRIM48Q8IWZ4 208 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 SLC35F3Q8IY50 421 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 AFAP1L2Q8N4X5 818 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 EID2Q8N6I1 236 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 KYQ8NBH2 561 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 HIST1H2AHQ96KK5 128 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 NRTNQ99748 197 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 HIST1H2AJQ99878 128 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 H2AFJQ9BTM1 129 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 HGH1Q9BTY7 390 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 TRIM54Q9BYV2 358 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 KIR3DX1Q9H7L2 352 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 POT1Q9NUX5 634 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 MRGBPQ9NV56 204 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 ARL15Q9NXU5 204 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 POLG2Q9UHN1 485 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 RAPGEFL1Q9UHV5 662 aa16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 TDRKHQ9Y2W6 561 aaKnown RBP16.41■□□□□ 0.22
EXOSC3-203ENST00000465229 TRPC5OSA6NMA1 111 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 SYCE1LA8MT33 242 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 UBXN8O00124 270 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 PPM1DO15297 605 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 SIGLEC6O43699 453 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 FASLGP48023 281 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 AP1S2P56377 157 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 HHEXQ03014 270 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 UBAP2LQ14157 1087 aaKnown RBP16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 DNAL1Q4LDG9 190 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 VWA5B1Q5TIE3 1220 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 RINLQ6ZS11 566 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 ARL10Q8N8L6 244 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 FAM181AQ8N9Y4 354 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 FAM13CQ8NE31 585 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 OR9A1PQ8NGU1 263 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 ZFPM2Q8WW38 1151 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 EXT2Q93063 718 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 MENTQ9BUN1 341 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 TMEM9BQ9NQ34 198 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 PLAGL1Q9UM63 463 aa16.4■□□□□ 0.22
EXOSC3-203ENST00000465229 NCF1BA6NI72 391 aaPredicted RBP16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 NCF1CA8MVU1 366 aaPredicted RBP16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 B2RBV5 119 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 MYF5P13349 255 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 NCF1P14598 390 aaPredicted RBP16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 HERVK_113P63132 956 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 CDKL1Q00532 357 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 SLC14A1Q13336 389 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 GPR18Q14330 331 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 OR52E1Q8NGJ3 308 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 MAELQ96JY0 434 aaKnown RBP16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 APOLD1Q96LR9 279 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 CCDC138Q96M89 665 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 ERVK-6Q9BXR3 956 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 CD274Q9NZQ7 290 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 TMCO1Q9UM00 188 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 BTBD3Q9Y2F9 522 aa16.39■□□□□ 0.21
EXOSC3-203ENST00000465229 LY6G6EA0A0G2JKS1 128 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 SUPT3HB4E1H0 165 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 KLK8O60259 260 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 SUPT3HO75486 399 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 SLC16A8O95907 504 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 CD59P13987 128 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 CCND1P24385 295 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 CCR10P46092 362 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 ZXDCQ2QGD7 858 aaPredicted RBP16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 AASDHQ4L235 1098 aaPredicted RBP16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 CDKL4Q5MAI5 379 aa16.38■□□□□ 0.21
EXOSC3-203ENST00000465229 SH2D4BQ5SQS7 431 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms