RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C2P06681 752 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 GSTA1P08263 222 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 LIFP15018 202 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 GCAP28676 217 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 SLC19A1P41440 591 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 CCT5P48643 541 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 AP1S2P56377 157 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 UBE2IP63279 158 aaKnown RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 TIAL1Q01085 375 aaKnown RBP eCLIP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 PLCL1Q15111 1095 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 CEP85LQ5SZL2 805 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 DCAF12Q5T6F0 453 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 BORAQ6PGQ7 559 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 NAPRTQ6XQN6 538 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 TMEM26Q6ZUK4 368 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 FRA10AC1Q70Z53 315 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 ZNF761Q86XN6 746 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 FAM129CQ86XR2 697 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 CACNA2D3Q8IZS8 1091 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 LILRA3Q8N6C8 439 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 BMPERQ8N8U9 685 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 OR10G6Q8NH81 332 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 STAG3L4Q8TBR4 150 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 ATL1Q8WXF7 558 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 ALKBH8Q96BT7 664 aaKnown RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 AHCYL2Q96HN2 611 aaKnown RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 UBXN10Q96LJ8 280 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 ADNPQ9H2P0 1102 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 TFB2MQ9H5Q4 396 aaKnown RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 PARVBQ9HBI1 364 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 ZNF624Q9P2J8 865 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-209ENST00000465132 GALPQ9UBC7 116 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 DCDC2Q9UHG0 476 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 SPTA1P02549 2419 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 BSNQ9UPA5 3926 aa16.9■□□□□ 0.3
CPSF4-209ENST00000465132 TLN1Q9Y490 2541 aaKnown RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 BTN3A1O00481 513 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 PHGDHO43175 533 aaKnown RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 KLHL2O95198 593 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 EML2O95834 649 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 S100BP04271 92 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 RBP1P09455 135 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 SLC35E2BP0CK96 405 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 SHMT2P34897 504 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 MAGEA12P43365 314 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 PPM1FP49593 454 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 RAB15P59190 212 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 ZNF844Q08AG5 666 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 ARHGAP19Q14CB8 494 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 ACAP2Q15057 778 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 ANKS6Q68DC2 871 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 FBXO38Q6PIJ6 1188 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 CMC1Q7Z7K0 106 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 VRK3Q8IV63 474 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 OR2W6PQ8NHA6 318 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 LCN9Q8WX39 176 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 PGM2Q96G03 612 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 ZIM3Q96PE6 472 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 SLC30A3Q99726 388 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 ZMYND15Q9H091 742 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 IQCGQ9H095 443 aaKnown RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 SCHIP1Q9P0W5 487 aaPredicted RBP16.89■□□□□ 0.29
CPSF4-209ENST00000465132 SPATA7Q9P0W8 599 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 TMCO1Q9UM00 188 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 NFS1Q9Y697 457 aa16.89■□□□□ 0.29
CPSF4-209ENST00000465132 HMX2A2RU54 273 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 GFYI3L273 518 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 DUX1O43812 170 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 RAD1O60671 282 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 C1orf105O95561 183 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 PRKAA1Q13131 559 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 CSHL1Q14406 222 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 CDKL4Q5MAI5 379 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 WDR74Q6RFH5 385 aaPredicted RBP16.88■□□□□ 0.29
CPSF4-209ENST00000465132 CYHR1Q6ZMK1 362 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 PIWIL4Q7Z3Z4 852 aaKnown RBP16.88■□□□□ 0.29
CPSF4-209ENST00000465132 RHEBL1Q8TAI7 183 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 SLC22A18Q96BI1 424 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 CCDC138Q96M89 665 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 TEFMQ96QE5 360 aaKnown RBP16.88■□□□□ 0.29
CPSF4-209ENST00000465132 SMC6Q96SB8 1091 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 CENPHQ9H3R5 247 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 SRMSQ9H3Y6 488 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 OR6C2Q9NZP2 312 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 PILRAQ9UKJ1 303 aa16.88■□□□□ 0.29
CPSF4-209ENST00000465132 TDRKHQ9Y2W6 561 aaKnown RBP16.88■□□□□ 0.29
CPSF4-209ENST00000465132 BOD1L1Q8NFC6 3051 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 TSPAN12O95859 305 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 AMD1P17707 334 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 HNMTP50135 292 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 RAB28P51157 221 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 POLE2P56282 527 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 CDKL1Q00532 357 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 GPR18Q14330 331 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 SNAP47Q5SQN1 464 aa16.87■□□□□ 0.29
CPSF4-209ENST00000465132 ARHGAP22Q7Z5H3 698 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms