RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-217	ENST00000463672	ZADH2	Q8N4Q0	377 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	OR2L3	Q8NG85	312 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	SSC4D	Q8WTU2	575 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	COG1	Q8WTW3	980 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	MFSD3	Q96ES6	412 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	BIRC8	Q96P09	236 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	SPSB2	Q99619	263 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	ZNF552	Q9H707	407 aa	Predicted RBP	13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	SEMA3G	Q9NS98	782 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	SLC22A11	Q9NSA0	550 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	LUZP4	Q9P127	313 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	CDC23	Q9UJX2	597 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	NFS1	Q9Y697	457 aa		13.61	□□□□□ -0.23
GGA1-217	ENST00000463672	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.6	□□□□□ -0.23
GGA1-217	ENST00000463672		E5RI56	91 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	NRDC	O43847	1150 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	CEP104	O60308	925 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	MATN4	O95460	622 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	ATXN8OS	P0DMR3	200 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	ITGA3	P26006	1051 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	CMPK1	P30085	196 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	MAGEA6	P43360	314 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	TUBB8	Q3ZCM7	444 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	PRR30	Q53SZ7	412 aa	Predicted RBP	13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	PRAMEF13	Q5VWM6	474 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	PRMT9	Q6P2P2	845 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	COX15	Q7KZN9	410 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	RNF44	Q7L0R7	432 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	OR2A1	Q8NGT9	310 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	MIPEP	Q99797	713 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	SLC6A20	Q9NP91	592 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	FAM114A2	Q9NRY5	505 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	INTS10	Q9NVR2	710 aa	Known RBP	13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	SAMD15	Q9P1V8	674 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	FBXL4	Q9UKA2	621 aa		13.6	□□□□□ -0.23
GGA1-217	ENST00000463672	ZNF839	A8K0R7	811 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	TCP11X1	B4DZS4	312 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	CTSV	O60911	334 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	NIPSNAP2	O75323	286 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	VPS26A	O75436	327 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	ERVK-10	P10266	1014 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	ERG	P11308	486 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	MLN	P12872	115 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	CHRM3	P20309	590 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	MCM3	P25205	808 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	PSMB5	P28074	263 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	FMO4	P31512	558 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	HSD17B2	P37059	387 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	KCNJ1	P48048	391 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	CARS	P49589	748 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	VSX2	P58304	361 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	KCNJ11	Q14654	390 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	ARHGAP19	Q14CB8	494 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	TTLL9	Q3SXZ7	439 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	CCSMST1	Q4G0I0	132 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	ANKRD20A4	Q4UJ75	823 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	SNRNP40	Q96DI7	357 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	ZFYVE21	Q9BQ24	234 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	ZNF304	Q9HCX3	659 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	UTP6	Q9NYH9	597 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	RUVBL2	Q9Y230	463 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	SHANK1	Q9Y566	2161 aa		13.59	□□□□□ -0.23
GGA1-217	ENST00000463672	NBAS	A2RRP1	2371 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672		A0A1W2PPV9	198 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	MAGEB16	A2A368	324 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	HYKK	A2RU49	373 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	OR2A25	A4D2G3	310 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	MYO1C	O00159	1063 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	SOCS6	O14544	535 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	PRPF4	O43172	522 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	PSIP1	O75475	530 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	CCNDBP1	O95273	360 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	DDAH2	O95865	285 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	CAT	P04040	527 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	PKM	P14618	531 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	EMP3	P54852	163 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	OCA2	Q04671	838 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	RBBP7	Q16576	425 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	MUM1	Q2TAK8	710 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	WASHC2D	Q5SRD0	308 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	AGAP7P	Q5VUJ5	663 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	FRMPD2B	Q6IN97	320 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	CASC4	Q6P4E1	433 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	CES3	Q6UWW8	571 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672		Q6ZS92	163 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	NEK10	Q6ZWH5	1172 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	CILP2	Q8IUL8	1156 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	LMNTD2	Q8IXW0	634 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	PRELID2	Q8N945	189 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	OR9A1P	Q8NGU1	263 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	PPP4R1	Q8TF05	950 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	SMPDL3A	Q92484	453 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	AGAP4	Q96P64	663 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	WDR77	Q9BQA1	342 aa	Predicted RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	SOX17	Q9H6I2	414 aa	Predicted RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	XAB2	Q9HCS7	855 aa	Known RBP	13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	CTSF	Q9UBX1	484 aa		13.58	□□□□□ -0.24
GGA1-217	ENST00000463672	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms