RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MBOAT1Q6ZNC8 495 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 VASH2Q86V25 355 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 CTAGE3PQ8IX95 158 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 IFT20Q8IY31 132 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 MYO1HQ8N1T3 1032 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 PPFIBP2Q8ND30 876 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 SNRNP27Q8WVK2 155 aaKnown RBP17.02■□□□□ 0.32
VPS52-214ENST00000463486 ANKRD7Q92527 254 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 ULBP3Q9BZM4 244 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 ACSS3Q9H6R3 686 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 AKIRIN1Q9H9L7 192 aaPredicted RBP17.02■□□□□ 0.32
VPS52-214ENST00000463486 SYTL2Q9HCH5 934 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 ENAMQ9NRM1 1142 aa17.02■□□□□ 0.32
VPS52-214ENST00000463486 STOX2Q9P2F5 926 aaPredicted RBP17.02■□□□□ 0.32
VPS52-214ENST00000463486 ATMQ13315 3056 aa17.02■□□□□ 0.31
VPS52-214ENST00000463486 TARM1B6A8C7 271 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 CDC7O00311 574 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 NRP2O60462 931 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 FAM153BP0C7A2 387 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 MAP4P27816 1152 aaKnown RBP17.01■□□□□ 0.31
VPS52-214ENST00000463486 GCGRP47871 477 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 FAM153CQ494X1 144 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 FIGLAQ6QHK4 219 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 CACNA2D3Q8IZS8 1091 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 NLGN4XQ8N0W4 816 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 RAB42Q8N4Z0 105 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 GALNT6Q8NCL4 622 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 NLGN4YQ8NFZ3 816 aaPredicted RBP17.01■□□□□ 0.31
VPS52-214ENST00000463486 MCOLN3Q8TDD5 553 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 ZUFSPQ96AP4 578 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 UBXN10Q96LJ8 280 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 CCDC138Q96M89 665 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 ZNF285Q96NJ3 590 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 CCNL2Q96S94 520 aaPredicted RBP17.01■□□□□ 0.31
VPS52-214ENST00000463486 MIPEPQ99797 713 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 CPNE5Q9HCH3 593 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 SLC6A20Q9NP91 592 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 PCDHB3Q9Y5E6 796 aa17.01■□□□□ 0.31
VPS52-214ENST00000463486 FAM208BQ5VWN6 2430 aa17■□□□□ 0.31
VPS52-214ENST00000463486 LOC101059948A0A1B0GTJ6 334 aa17■□□□□ 0.31
VPS52-214ENST00000463486 TMEM150CB9EJG8 249 aa17■□□□□ 0.31
VPS52-214ENST00000463486 CTSVO60911 334 aa17■□□□□ 0.31
VPS52-214ENST00000463486 SYF2O95926 243 aaKnown RBP17■□□□□ 0.31
VPS52-214ENST00000463486 NTRK1P04629 796 aa17■□□□□ 0.31
VPS52-214ENST00000463486 SPRP35270 261 aaPredicted RBP17■□□□□ 0.31
VPS52-214ENST00000463486 PCM1Q15154 2024 aa17■□□□□ 0.31
VPS52-214ENST00000463486 DEFB110Q30KQ9 67 aa17■□□□□ 0.31
VPS52-214ENST00000463486 CYB5D1Q6P9G0 228 aa17■□□□□ 0.31
VPS52-214ENST00000463486 ZNF517Q6ZMY9 492 aaPredicted RBP17■□□□□ 0.31
VPS52-214ENST00000463486 NKAPQ8N5F7 415 aaKnown RBP17■□□□□ 0.31
VPS52-214ENST00000463486 SMG1Q96Q15 3661 aaKnown RBP17■□□□□ 0.31
VPS52-214ENST00000463486 CYTH2Q99418 400 aa17■□□□□ 0.31
VPS52-214ENST00000463486 ACAT2Q9BWD1 397 aa17■□□□□ 0.31
VPS52-214ENST00000463486 SPRTNQ9H040 489 aaPredicted RBP17■□□□□ 0.31
VPS52-214ENST00000463486 SYNPO2LQ9H987 977 aa17■□□□□ 0.31
VPS52-214ENST00000463486 GPAMQ9HCL2 828 aa17■□□□□ 0.31
VPS52-214ENST00000463486 NOVA2Q9UNW9 492 aaKnown RBP17■□□□□ 0.31
VPS52-214ENST00000463486 OR2A25A4D2G3 310 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 ESPNB1AK53 854 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 PHGDHO43175 533 aaKnown RBP16.99■□□□□ 0.31
VPS52-214ENST00000463486 SCRG1O75711 98 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 ACSL3O95573 720 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 MYBL2P10244 700 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 CYP2A7P20853 494 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 F8A1P23610 371 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 RORAP35398 523 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 GMPRP36959 345 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 STAT5AP42229 794 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 PRDX1Q06830 199 aaKnown RBP16.99■□□□□ 0.31
VPS52-214ENST00000463486 ABHD18Q0P651 414 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 USP10Q14694 798 aaKnown RBP16.99■□□□□ 0.31
VPS52-214ENST00000463486 ZNF425Q6IV72 752 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 FBXO42Q6P3S6 717 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 AGTRAPQ6RW13 159 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 C6orf15Q6UXA7 325 aaPredicted RBP16.99■□□□□ 0.31
VPS52-214ENST00000463486 SPATA6LQ8N4H0 392 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 ESX1Q8N693 406 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 SGPP1Q9BX95 441 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 EPB41L4BQ9H329 900 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 EURLQ9NYK6 297 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.99■□□□□ 0.31
VPS52-214ENST00000463486 TXNDC16Q9P2K2 825 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 PLCL2Q9UPR0 1127 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 ANKRD12Q6UB98 2062 aa16.99■□□□□ 0.31
VPS52-214ENST00000463486 ZNF839A8K0R7 811 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 K7ENP7 123 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 ENO2P09104 434 aaPredicted RBP16.98■□□□□ 0.31
VPS52-214ENST00000463486 LIFP15018 202 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 PHBP35232 272 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 UCNP55089 124 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 ITGA1P56199 1179 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 AP1S2P56377 157 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 TMPRSS3P57727 454 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 RAB10P61026 200 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 GPS2Q13227 327 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 ICE2Q659A1 982 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 ZNF385CQ66K41 422 aaPredicted RBP16.98■□□□□ 0.31
VPS52-214ENST00000463486 INO80CQ6PI98 192 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms