RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 SMPDL3BQ92485 455 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 HGH1Q9BTY7 390 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 BEX2Q9BXY8 128 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 THAP2Q9H0W7 228 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 MVB12BQ9H7P6 319 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 C14orf105Q9NVL8 296 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 HPSEQ9Y251 543 aa12.6□□□□□ -0.39
C9orf3-211ENST00000463372 EIF3LQ9Y262 564 aaKnown RBP12.6□□□□□ -0.39
C9orf3-211ENST00000463372 RNF223E7ERA6 249 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 SEC24DO94855 1032 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-211ENST00000463372 MMEP08473 750 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 CHRM5P08912 532 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-211ENST00000463372 PIRTP0C851 137 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 EGR1P18146 543 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 BMP5P22003 454 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 DEFA6Q01524 100 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 STIM1Q13586 685 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 EXOC3L4Q17RC7 722 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 HYAL4Q2M3T9 481 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 FBXL19-AS1Q494R0 122 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 ZC3H12BQ5HYM0 836 aaKnown RBP12.59□□□□□ -0.39
C9orf3-211ENST00000463372 ERMARDQ5T6L9 678 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 ALG1LQ6GMV1 187 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 RTL6Q6ICC9 239 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 TMCO3Q6UWJ1 677 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 DET1Q7L5Y6 550 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 MEIOBQ8N635 442 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 SLC5A8Q8N695 610 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 PHC3Q8NDX5 983 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 OR52N2Q8NGI0 321 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 ZMYND19Q96E35 227 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-211ENST00000463372 DEFB127Q9H1M4 99 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 TRPC4Q9UBN4 977 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-211ENST00000463372 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
C9orf3-211ENST00000463372 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 ISM1B1AKI9 464 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 MSH3P20585 1137 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 AKT1P31749 480 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 SHMT2P34897 504 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 SOX18P35713 384 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 NR1H2P55055 460 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 HSPB2Q16082 182 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 FREM1Q5H8C1 2179 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 WIPI1Q5MNZ9 446 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-211ENST00000463372 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 TMEM205Q6UW68 189 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 UNC5AQ6ZN44 842 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 NOP9Q86U38 636 aaKnown RBP12.58□□□□□ -0.4
C9orf3-211ENST00000463372 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-211ENST00000463372 DDHD1Q8NEL9 900 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 C16orf52Q8NHV5 167 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 SLC30A5Q8TAD4 765 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 METTL21AQ8WXB1 218 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 NPAS2Q99743 824 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 SELENOSQ9BQE4 189 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 VPS16Q9H269 839 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 MAGEE1Q9HCI5 957 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 BPIFA1Q9NP55 256 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 SPHK1Q9NYA1 384 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 ICKQ9UPZ9 632 aa12.58□□□□□ -0.4
C9orf3-211ENST00000463372 OR14I1A6ND48 311 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 SIGLEC16A6NMB1 481 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 CDK2AP1O14519 115 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 MAN1A2O60476 641 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 WDR1O75083 606 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 C8orf89P0DMQ9 161 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 MAGP20916 626 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 AMPD1P23109 780 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 PON1P27169 355 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 SOX5P35711 763 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 HCAR3P49019 387 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 CYB561P49447 251 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 ZNF135P52742 658 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-211ENST00000463372 KRT85P78386 507 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 SORDQ00796 357 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 CUL4AQ13619 759 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 DPYSQ14117 519 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 PPP2R5EQ16537 467 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 ACKR1Q16570 336 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 FIGNQ5HY92 759 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 C1orf185Q5T7R7 199 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 DAAM2Q86T65 1068 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 SULF2Q8IWU5 870 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 LILRA3Q8N6C8 439 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-211ENST00000463372 PPP1R14CQ8TAE6 165 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 FLVCR1-AS1Q8TAF5 88 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 CCDC34Q96HJ3 373 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 LCORQ96JN0 433 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-211ENST00000463372 SMC6Q96SB8 1091 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 ZWILCHQ9H900 591 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 UBTD1Q9HAC8 227 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
C9orf3-211ENST00000463372 CWC15Q9P013 229 aaKnown RBP12.57□□□□□ -0.4
C9orf3-211ENST00000463372 NPFFR2Q9Y5X5 522 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 WNK1Q9H4A3 2382 aa12.57□□□□□ -0.4
C9orf3-211ENST00000463372 FITM1A5D6W6 292 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 QSOX1O00391 747 aa12.56□□□□□ -0.4
C9orf3-211ENST00000463372 CASKO14936 926 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms