RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 ADARP55265 1226 aaKnown RBP17.11■□□□□ 0.33
SSB-206ENST00000461708 SESN2P58004 480 aaPredicted RBP17.11■□□□□ 0.33
SSB-206ENST00000461708 MRPL49Q13405 166 aaKnown RBP17.11■□□□□ 0.33
SSB-206ENST00000461708 EIF2S3LQ2VIR3 472 aaKnown RBP17.11■□□□□ 0.33
SSB-206ENST00000461708 RNF187Q5TA31 235 aaPredicted RBP17.11■□□□□ 0.33
SSB-206ENST00000461708 PRAMEF13Q5VWM6 474 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 MRNIPQ6NTE8 343 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 IGFL2Q6UWQ7 119 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 COX15Q7KZN9 410 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 GAS2L3Q86XJ1 694 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 C2orf73Q8N5S3 287 aaPredicted RBP17.11■□□□□ 0.33
SSB-206ENST00000461708 MAIP1Q8WWC4 291 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 C19orf60Q96EN9 201 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 FOPNLQ96NB1 174 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 SEMA3GQ9NS98 782 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 ASF1BQ9NVP2 202 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 SPATA7Q9P0W8 599 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 CDC23Q9UJX2 597 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 FAM169AQ9Y6X4 670 aa17.11■□□□□ 0.33
SSB-206ENST00000461708 CREBBPQ92793 2442 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 VSTM2BA6NLU5 285 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 PFDN6O15212 129 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 CTSVO60911 334 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 MATN4O95460 622 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 ARNTP27540 789 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 FOXL2P58012 376 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 GBX1Q14549 363 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 TYSND1Q2T9J0 566 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 PRMT9Q6P2P2 845 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 KIRREL2Q6UWL6 708 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 ZNF662Q6ZS27 426 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 SDCCAG8Q86SQ7 713 aaPredicted RBP17.1■□□□□ 0.33
SSB-206ENST00000461708 TAX1BP1Q86VP1 789 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
SSB-206ENST00000461708 CISD2Q8N5K1 135 aaKnown RBP17.1■□□□□ 0.33
SSB-206ENST00000461708 OR2L3Q8NG85 312 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 OR2A1Q8NGT9 310 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 PPP4R1Q8TF05 950 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 LPGAT1Q92604 370 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 BIRC8Q96P09 236 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 SLC6A20Q9NP91 592 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 MAP10Q9P2G4 905 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 CIDEBQ9UHD4 219 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 HS3ST3B1Q9Y662 390 aa17.1■□□□□ 0.33
SSB-206ENST00000461708 HEATR5BQ9P2D3 2071 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 NBPF19A0A087WUL8 3843 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 PHF2O75151 1096 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 ESR1P03372 595 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 TPSB2P20231 275 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 ITGA3P26006 1051 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 NMBRP28336 390 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 EMP3P54852 163 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 CRADDP78560 199 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 BASP1P80723 227 aaKnown RBP17.09■□□□□ 0.33
SSB-206ENST00000461708 NR6A1Q15406 480 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 AGAP7PQ5VUJ5 663 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 LRRC8BQ6P9F7 803 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 TMEM151BQ8IW70 566 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 PRR7Q8TB68 274 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 SKA2Q8WVK7 121 aaPredicted RBP17.09■□□□□ 0.33
SSB-206ENST00000461708 INPP5DQ92835 1189 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 AGAP4Q96P64 663 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 WDR77Q9BQA1 342 aaPredicted RBP17.09■□□□□ 0.33
SSB-206ENST00000461708 HOMER3Q9NSC5 361 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 COPG1Q9Y678 874 aaKnown RBP17.09■□□□□ 0.33
SSB-206ENST00000461708 NFS1Q9Y697 457 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 SVILO95425 2214 aa17.09■□□□□ 0.33
SSB-206ENST00000461708 DIDO1Q9BTC0 2240 aaKnown RBP17.09■□□□□ 0.33
SSB-206ENST00000461708 HYKKA2RU49 373 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 VAPBO95292 243 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 ERGP11308 486 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 MCM3P25205 808 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 CARSP49589 748 aaKnown RBP17.08■□□□□ 0.32
SSB-206ENST00000461708 EIF3BP55884 814 aaKnown RBP17.08■□□□□ 0.32
SSB-206ENST00000461708 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 CCSMST1Q4G0I0 132 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 CTSL3PQ5NE16 218 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 IRAK1BP1Q5VVH5 260 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 RNF44Q7L0R7 432 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 CUZD1Q86UP6 607 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.08■□□□□ 0.32
SSB-206ENST00000461708 MIPEPQ99797 713 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 LHPPQ9H008 270 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 ZBTB20Q9HC78 741 aaPredicted RBP17.08■□□□□ 0.32
SSB-206ENST00000461708 AGPAT4Q9NRZ5 378 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 CTSFQ9UBX1 484 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 SOX13Q9UN79 622 aa17.08■□□□□ 0.32
SSB-206ENST00000461708 A0A1W2PPV9 198 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 OR2A25A4D2G3 310 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 ANKUB1A6NFN9 424 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 RNF224P0DH78 156 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 OGNP20774 298 aaKnown RBP17.07■□□□□ 0.32
SSB-206ENST00000461708 MGAT1P26572 445 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 HSD17B2P37059 387 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms