RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LRRC8EQ6NSJ5 796 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 ZNF517Q6ZMY9 492 aaPredicted RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 PIWIL4Q7Z3Z4 852 aaKnown RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 PTRH1Q86Y79 214 aaKnown RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 SPNS2Q8IVW8 549 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 PALM2Q8IXS6 379 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 SYTL1Q8IYJ3 562 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 DENND1AQ8TEH3 1009 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 MIPEPQ99797 713 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 CHRNA10Q9GZZ6 450 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 SAYSD1Q9NPB0 183 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 ZNF71Q9NQZ8 489 aaPredicted RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 PLCL2Q9UPR0 1127 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 PABPN1LA6NDY0 278 aaKnown RBP14.79□□□□□ -0.04
VARS-219ENST00000461328 MYO1CO00159 1063 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 ZSCAN9O15535 394 aaPredicted RBP14.79□□□□□ -0.04
VARS-219ENST00000461328 FKBP9O95302 570 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 AGXTP21549 392 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 MGAT5Q09328 741 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 UGT8Q16880 541 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 LCN10Q6JVE6 187 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 C8orf74Q6P047 294 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 UBE2R2Q712K3 238 aaPredicted RBP14.79□□□□□ -0.04
VARS-219ENST00000461328 GALNT7Q86SF2 657 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 MYO1HQ8N1T3 1032 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 ENDOVQ8N8Q3 282 aaKnown RBP14.79□□□□□ -0.04
VARS-219ENST00000461328 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 PYROXD1Q8WU10 500 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 SMPDL3AQ92484 453 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 TRIM44Q96DX7 344 aaPredicted RBP14.79□□□□□ -0.04
VARS-219ENST00000461328 ABHD17AQ96GS6 310 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 PKP4Q99569 1192 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 ACAT2Q9BWD1 397 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 PLAC1Q9HBJ0 212 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 TXLNGQ9NUQ3 528 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 ABCF3Q9NUQ8 709 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 CDC23Q9UJX2 597 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 CORO1CQ9ULV4 474 aaPredicted RBP14.79□□□□□ -0.04
VARS-219ENST00000461328 SNX7Q9UNH6 387 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 AP1M2Q9Y6Q5 423 aa14.79□□□□□ -0.04
VARS-219ENST00000461328 HELZ2Q9BYK8 2649 aaKnown RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 C9J4A7 227 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 E7ESA3 106 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 MKRN2OSH3BPM6 223 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 PYCARD-AS1I3L0S3 204 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 EIF3FO00303 357 aaPredicted RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 TP73O15350 636 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 SUV39H1O43463 412 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 ZBTB14O43829 449 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 RFPL1O75677 317 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 AHSGP02765 367 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 RAB40ALP0C0E4 278 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 SAT1P21673 171 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 GABRB3P28472 473 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 CMPK1P30085 196 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 HSD17B2P37059 387 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 SKIV2L2P42285 1042 aaKnown RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 GABRA4P48169 554 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 PMS2P54278 862 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 PNLIPRP1P54315 467 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 CDKN2DP55273 166 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 IL10RAQ13651 578 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 FASTKQ14296 549 aaKnown RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 ARHGAP19Q14CB8 494 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 NAA25Q14CX7 972 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 CYP2A13Q16696 494 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 LACTB2Q53H82 288 aaPredicted RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 ZC3H12BQ5HYM0 836 aaKnown RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 HECTD2Q5U5R9 776 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 DUPD1Q68J44 220 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 FAM45BPQ6NSW5 357 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 FIGLAQ6QHK4 219 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 SUSD1Q6UWL2 747 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 ZNF572Q7Z3I7 529 aaPredicted RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 CCDC25Q86WR0 208 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 DNAJC22Q8N4W6 341 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 ZNF655Q8N720 491 aaPredicted RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 OR2L3Q8NG85 312 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 FAM45AQ8TCE6 357 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 THAP4Q8WY91 577 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 LINGO1Q96FE5 620 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 DPH2Q9BQC3 489 aaPredicted RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 NLNQ9BYT8 704 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 SPRTNQ9H040 489 aaPredicted RBP14.78□□□□□ -0.04
VARS-219ENST00000461328 EURLQ9NYK6 297 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 GRHL1Q9NZI5 618 aa14.78□□□□□ -0.04
VARS-219ENST00000461328 HCRTR1O43613 425 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 CCNDBP1O95273 360 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 SLC16A8O95907 504 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 GRIA3P42263 894 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 PLTPP55058 493 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 CAV1Q03135 178 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 FRG1Q14331 258 aaKnown RBP14.77□□□□□ -0.05
VARS-219ENST00000461328 NCF4Q15080 339 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 WHAMMP3Q1A5X7 153 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 THEMIS2Q5TEJ8 643 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 C1orf189Q5VU69 101 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 TLDC1Q6P9B6 456 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 PAQR3Q6TCH7 311 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms