RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GPD1P21695 349 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CD9P21926 228 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CALB2P22676 271 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 DDX6P26196 483 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 AVPR2P30518 371 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 AKT1P31749 480 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 OPRD1P41143 372 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MATKP42679 507 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MAGEA1P43355 309 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 IFNAR2P48551 515 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MARCKSL1P49006 195 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TAS2R40P59535 323 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 GNGT1P63211 74 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MC2RQ01718 297 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 KLC1Q07866 573 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 DMPKQ09013 629 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 FCHO2Q0JRZ9 810 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MSLNQ13421 630 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 EIF4EBP2Q13542 120 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC12A1Q13621 1099 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF268Q14587 947 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PON2Q15165 354 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC18A3Q16572 532 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 BTBD16Q32M84 506 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM133BQ5BKY9 247 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 FSCBQ5H9T9 825 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 EFHC1Q5JVL4 640 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 NDUFAF5Q5TEU4 345 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ARHGAP40Q5TG30 622 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 IL23RQ5VWK5 629 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PLEKHA7Q6IQ23 1121 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 IRGCQ6NXR0 463 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MSANTD2Q6P1R3 559 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SCYL2Q6P3W7 929 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 DCUN1D2Q6PH85 259 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 KDM7AQ6ZMT4 941 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TRIM72Q6ZMU5 477 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TPRG1Q6ZUI0 275 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CYP4V2Q6ZWL3 525 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 RAB11FIP2Q7L804 512 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TMPRSS9Q7Z410 1059 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 EXOC3L1Q86VI1 746 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CNGA4Q8IV77 575 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CHCHD4Q8N4Q1 142 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ARFGAP2Q8N6H7 521 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SPERTQ8NA61 448 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PCYOX1LQ8NBM8 494 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CPEB3Q8NE35 698 aaKnown RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 OR56A1Q8NGH5 318 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 OR52K2Q8NGK3 314 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM172AQ8WUF8 416 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 SORCS1Q8WY21 1168 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 OVCA2Q8WZ82 227 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 IGSF8Q969P0 613 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ZDHHC12Q96GR4 267 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 CCDC42Q96M95 316 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PRICKLE1Q96MT3 831 aaPredicted RBP4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF570Q96NI8 536 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 NUP85Q9BW27 656 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TEX101Q9BY14 249 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 TWSG1Q9GZX9 223 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 ECT2Q9H8V3 914 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 IL1RAPL1Q9NZN1 696 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 MPP6Q9NZW5 540 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 PIAS3Q9Y6X2 628 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 KNL1Q8NG31 2342 aa4.77□□□□□ -1.65
ATPAF1-203ENST00000460928 C5orf60A6NFR6 353 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CYSRT1A8MQ03 144 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 KCNU1A8MYU2 1149 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 NEDD8-MDP1E9PL57 170 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 F5H697 171 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CHADO15335 359 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ACSL4O60488 711 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 TBL1XO60907 577 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CBFA2T3O75081 653 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ERN1O75460 977 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 STAMBPO95630 424 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 FGF19O95750 216 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 EGFP01133 1207 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 IGLV3-27P01718 113 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CYP1A2P05177 515 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 DCNP07585 359 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CD48P09326 243 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 H2AFZP0C0S5 128 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 EGR2P11161 476 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 GZMAP12544 262 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ACADSP16219 412 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 PSMA2P25787 234 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 PSMA3P25788 255 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 MIPP30301 263 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 NTSR1P30989 418 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 PRKAR1BP31321 381 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 SDC4P31431 198 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CD70P32970 193 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CXCR3P49682 368 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ANXA11P50995 505 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 DNA2P51530 1060 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 HSD11B2P80365 405 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 HSPA14Q0VDF9 509 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms