RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 VPS26BQ4G0F5 336 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 SLC44A4Q53GD3 710 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 PYCR3Q53H96 274 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 HABP4Q5JVS0 413 aaKnown RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 SAMD4BQ5PRF9 694 aaKnown RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 IER5LQ5T953 404 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 GALNT18Q6P9A2 607 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 WASH2PQ6VEQ5 465 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 MSANTD1Q6ZTZ1 278 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 ARPINQ7Z6K5 226 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 TMEM126BQ8IUX1 230 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 RIMKLAQ8IXN7 391 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 SLC15A3Q8IY34 581 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D21Q8IYX1 336 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 OR2T34Q8NGX1 318 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 FAM3CQ92520 227 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 TFGQ92734 400 aaPredicted RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 STMN2Q93045 179 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 ZUFSPQ96AP4 578 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 TESCQ96BS2 214 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 LRRC58Q96CX6 371 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 REPS1Q96D71 796 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 GAS2L1Q99501 681 aaPredicted RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 HAUS8Q9BT25 410 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 EFCAB11Q9BUY7 163 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 PITHD1Q9GZP4 211 aaPredicted RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 TWSG1Q9GZX9 223 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 MUC13Q9H3R2 512 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 CLMPQ9H6B4 373 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 NT5DC2Q9H857 520 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 WASH6PQ9NQA3 447 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 FARSBQ9NSD9 589 aaKnown RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 USP36Q9P275 1121 aaKnown RBP7.8□□□□□ -1.16
SFPQ-202ENST00000460428 ZNHIT2Q9UHR6 403 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 MAN2B2Q9Y2E5 1009 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 PCDHA9Q9Y5H5 950 aa7.8□□□□□ -1.16
SFPQ-202ENST00000460428 MYO9BQ13459 2157 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3DA0A087WVF3 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3IA0A087WXS9 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3EA0A087X179 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3KA0A087X1G2 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 KANSL1LA0AUZ9 987 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3FA6NER0 549 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PRORSD1PA6NEY8 169 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CCDC154A6NI56 674 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3LB9A6J9 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 E7EQ34 232 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CACNB4O00305 520 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 NR5A2O00482 541 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CASQ2O14958 399 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 MAP3K7O43318 606 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 DNAJA2O60884 412 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 SEC22BO75396 215 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PDE5AO76074 875 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 SORBS2O94875 1100 aaKnown RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 ANP32DO95626 131 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 IL6P05231 212 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3HP0C7X1 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 C1GALT1C1LP0DN25 315 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CHRNB1P11230 501 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 BCKDHAP12694 445 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 ANPEPP15144 967 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 AMD1P17707 334 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 GABRG2P18507 467 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 XRCC1P18887 633 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 NDUFV2P19404 249 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PBLDP30039 288 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 NUDT1P36639 197 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 ARL1P40616 181 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PIK3CBP42338 1070 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 HALP42357 657 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TPMTP51580 245 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CCR5P51681 352 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CLNS1AP54105 237 aaKnown RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 EEFSECP57772 596 aaKnown RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBPL1P62380 186 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 RPL38P63173 70 aaKnown RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 HMGCS1Q01581 520 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PRKCQQ04759 706 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TDGQ13569 410 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PWP1Q13610 501 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 RCN1Q15293 331 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 IMPG1Q17R60 797 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 DPY19L1Q2PZI1 675 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 XKR6Q5GH73 641 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PAGE2BQ5JRK9 111 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 PAGE3Q5JUK9 113 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 SWT1Q5T5J6 900 aaKnown RBP7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CACHD1Q5VU97 1274 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3GQ6DHY5 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 TBC1D3CQ6IPX1 549 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 MED27Q6P2C8 311 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 ZFP1Q6P2D0 407 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 CRTC3Q6UUV7 619 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 NXPE4Q6UWF7 544 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 SUSD1Q6UWL2 747 aa7.79□□□□□ -1.16
SFPQ-202ENST00000460428 ABRAXAS1Q6UWZ7 409 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms