RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 IFT80Q9P2H3 777 aaPredicted RBP9.61□□□□□ -0.87
HDLBP-228ENST00000459788 PCYOX1Q9UHG3 505 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 PLAGL1Q9UM63 463 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 SNX12Q9UMY4 172 aa9.61□□□□□ -0.87
HDLBP-228ENST00000459788 MAST4O15021 2626 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 OR2A25A4D2G3 310 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 CTAGE9A4FU28 777 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ARGFXA6NJG6 315 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 PEX12O00623 359 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 TXNDC9O14530 226 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 NDC80O14777 642 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 CHRM3P20309 590 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ITGAXP20702 1163 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 HRH2P25021 359 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 CMPK1P30085 196 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 GRIA3P42263 894 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 SKIV2L2P42285 1042 aaKnown RBP9.6□□□□□ -0.87
HDLBP-228ENST00000459788 PTGIRP43119 386 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 CLCN7P51798 805 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ABATP80404 500 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 PTK6Q13882 451 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 PTCHD3Q3KNS1 767 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 PRAMEF17Q5VTA0 474 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ANKRD22Q5VYY1 191 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 FCRL6Q6DN72 434 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF470Q6ECI4 717 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 UGT3A1Q6NUS8 523 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 IGFL3Q6UXB1 125 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 KIAA0408Q6ZU52 694 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 RNF44Q7L0R7 432 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 OVCH1Q7RTY7 1134 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 MRGPREQ86SM8 312 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ATCAYQ86WG3 371 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF655Q8N720 491 aaPredicted RBP9.6□□□□□ -0.87
HDLBP-228ENST00000459788 OR2L3Q8NG85 312 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 OR2A1Q8NGT9 310 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 SKA2Q8WVK7 121 aaPredicted RBP9.6□□□□□ -0.87
HDLBP-228ENST00000459788 INPP5DQ92835 1189 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 MIB2Q96AX9 1013 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF669Q96BR6 464 aaPredicted RBP9.6□□□□□ -0.87
HDLBP-228ENST00000459788 MVB12AQ96EY5 273 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 NRTNQ99748 197 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 EBNA1BP2Q99848 306 aaKnown RBP9.6□□□□□ -0.87
HDLBP-228ENST00000459788 SELENOSQ9BQE4 189 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 TRIM55Q9BYV6 548 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 KLHL25Q9H0H3 589 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 GRPEL1Q9HAV7 217 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 GPR83Q9NYM4 423 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 DHRS7Q9Y394 339 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 SCN2AQ99250 2005 aa9.6□□□□□ -0.87
HDLBP-228ENST00000459788 A0A1W2PPV9 198 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CLEC18AA5D8T8 446 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 GFYI3L273 518 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 PRPF4O43172 522 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 HCRTR1O43613 425 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 ZBTB14O43829 449 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 NIPSNAP2O75323 286 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 AVILO75366 819 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 VPS26AO75436 327 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 ALPPP05187 535 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 PGAM1P18669 254 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 MMP11P24347 488 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 VPS41P49754 854 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 PRDX1Q06830 199 aaKnown RBP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CBLBQ13191 982 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 FRG1Q14331 258 aaKnown RBP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 TRIP13Q15645 432 aaPredicted RBP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 KLHL38Q2WGJ6 581 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 RNASEH2BQ5TBB1 312 aaKnown RBP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 VWA5B1Q5TIE3 1220 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 GARNL3Q5VVW2 1013 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 MLIPQ5VWP3 458 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CES3Q6UWW8 571 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CLEC18BQ6UXF7 455 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CNTN4Q8IWV2 1026 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 SLC35F6Q8N357 371 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CLEC1AQ8NC01 280 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CLEC18CQ8NCF0 446 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 ASB11Q8WXH4 323 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 LRRC39Q96DD0 335 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 MS4A14Q96JA4 679 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 IL17FQ96PD4 163 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 FAM129AQ9BZQ8 928 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 PCBD2Q9H0N5 130 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 SEMA3GQ9NS98 782 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CUTCQ9NTM9 273 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 IRAK4Q9NWZ3 460 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 RNF14Q9UBS8 474 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CORO1CQ9ULV4 474 aaPredicted RBP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CDC14AQ9UNH5 594 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 CRYL1Q9Y2S2 319 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 PTRH2Q9Y3E5 179 aaKnown RBP9.59□□□□□ -0.87
HDLBP-228ENST00000459788 NFS1Q9Y697 457 aa9.59□□□□□ -0.87
HDLBP-228ENST00000459788 POLEQ07864 2286 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 ARHGEF33A8MVX0 844 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 AGPSO00116 658 aa9.58□□□□□ -0.88
HDLBP-228ENST00000459788 DNALI1O14645 258 aaPredicted RBP9.58□□□□□ -0.88
HDLBP-228ENST00000459788 SLC16A5O15375 505 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms