RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PARS2Q7L3T8 475 aaKnown RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 MICU2Q8IYU8 434 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 CELF5Q8N6W0 485 aaKnown RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 RASGEF1AQ8N9B8 481 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ZFP28Q8NHY6 868 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 FIG4Q92562 907 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 POP5Q969H6 163 aaKnown RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ZNF707Q96C28 371 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ITCHQ96J02 903 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 VPS50Q96JG6 964 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 TUBA8Q9NY65 449 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 INVSQ9Y283 1065 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 RETP07949 1114 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ADH5P11766 374 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ETS2P15036 469 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 MAP4P27816 1152 aaKnown RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 GZMMP51124 257 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ABRQ12979 859 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 LSAMPQ13449 338 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ACOX1Q15067 660 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 SYTL3Q4VX76 610 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 CYBRD1Q53TN4 286 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 DHRSXQ8N5I4 330 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 WDR20Q8TBZ3 569 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 FOXJ1Q92949 421 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 TMEM159Q96B96 161 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 CCDC138Q96M89 665 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 TSSK3Q96PN8 268 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 SLC6A13Q9NSD5 602 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 PTTG2Q9NZH5 202 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 ADGRE2Q9UHX3 823 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 PPT2Q9UMR5 302 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 MRPS23Q9Y3D9 190 aaKnown RBP16.2■□□□□ 0.18
CCDC43-202ENST00000457422 LAMA3Q16787 3333 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
CCDC43-202ENST00000457422 LINC01553A4QN01 128 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 C5orf67F2Z3F1 127 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 CXCR6O00574 342 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 PER2O15055 1255 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 PRMT3O60678 531 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 BMP10O95393 424 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 IL1RNP18510 177 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 CD22P20273 847 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 PREPP48147 710 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 IRF8Q02556 426 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 MTAPQ13126 283 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 GRIN2CQ14957 1233 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 DPY19L1Q2PZI1 675 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 LRRK1Q38SD2 2015 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 NOXRED1Q6NXP6 359 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 USP51Q70EK9 711 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 GPR149Q86SP6 731 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 THOC6Q86W42 341 aaKnown RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 ALDH16A1Q8IZ83 802 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 RNF175Q8N4F7 328 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 LILRA3Q8N6C8 439 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 TRIML2Q8N7C3 387 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 MAGEE2Q8TD90 523 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 AP2M1Q96CW1 435 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 METTL2AQ96IZ6 378 aaKnown RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 CCM2Q9BSQ5 444 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 EPHX3Q9H6B9 360 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 CARS2Q9HA77 564 aaKnown RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 WBP1LQ9NX94 342 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 STOX2Q9P2F5 926 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
CCDC43-202ENST00000457422 MUC22E2RYF6 1773 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-202ENST00000457422 H0Y858 1186 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 H0YAE9 185 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 WNT9AO14904 365 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 CATP04040 527 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 HOXB6P17509 224 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ADARB1P78563 741 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 TMEM115Q12893 351 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 PSRC1Q6PGN9 363 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 TTC33Q6PID6 262 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 TBPL2Q6SJ96 375 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 PATL1Q86TB9 770 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 GPR180Q86V85 440 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 NLRP8Q86W28 1048 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 PHACTR4Q8IZ21 702 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 PHOSPHO2Q8TCD6 241 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 APOLD1Q96LR9 279 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 TBCDQ9BTW9 1192 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 WRAP53Q9BUR4 548 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 H0YIV9 168 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 CLGNO14967 610 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 B3GALT4O96024 378 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ADH1CP00326 375 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 PRPS1L1P21108 318 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 HNF4AP41235 474 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 BDKRB1P46663 353 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ALDH3A2P51648 485 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 METAP1P53582 386 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 C21orf58P58505 322 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ST8SIA6P61647 398 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ZNF658BQ4V348 819 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms