RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 HIST1H2ADP20671 130 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 CD82P27701 267 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 PSMB5P28074 263 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 PNLIPRP1P54315 467 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 POU4F1Q01851 419 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 CLN3Q13286 438 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 IL11RAQ14626 422 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 CYB5D1Q6P9G0 228 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 SPACA3Q8IXA5 215 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 SYTL1Q8IYJ3 562 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 NKAPQ8N5F7 415 aaKnown RBP9.72□□□□□ -0.85
RFX3-210ENST00000457373 C19orf47Q8N9M1 422 aaKnown RBP9.72□□□□□ -0.85
RFX3-210ENST00000457373 FBXO15Q8NCQ5 510 aaPredicted RBP9.72□□□□□ -0.85
RFX3-210ENST00000457373 MCOLN3Q8TDD5 553 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 DLG3Q92796 817 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 N4BP2L2Q92802 583 aaPredicted RBP9.72□□□□□ -0.85
RFX3-210ENST00000457373 ZNF501Q96CX3 271 aaPredicted RBP9.72□□□□□ -0.85
RFX3-210ENST00000457373 HIST1H2AHQ96KK5 128 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 MIPEPQ99797 713 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 HIST1H2AJQ99878 128 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 ZPBPQ9BS86 351 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 MCMBPQ9BTE3 642 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 H2AFJQ9BTM1 129 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 ACAT2Q9BWD1 397 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 PITPNM3Q9BZ71 974 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 UNKQ9C0B0 810 aaKnown RBP9.72□□□□□ -0.85
RFX3-210ENST00000457373 GPAMQ9HCL2 828 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 FAM60AQ9NP50 221 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 PDE10AQ9Y233 779 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 BTRCQ9Y297 605 aa9.72□□□□□ -0.85
RFX3-210ENST00000457373 A0A087WV48 116 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TEX51A0A1B0GUA7 166 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 A0A1W2PPV9 198 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ZNF839A8K0R7 811 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TMEM150CB9EJG8 249 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 STMND1H3BQB6 276 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 SLC16A5O15375 505 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 PHGDHO43175 533 aaKnown RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 RAD1O60671 282 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 STK17BO94768 372 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 KIAA0754O94854 1291 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TIAF1O95411 115 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TSPAN12O95859 305 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 SLC16A8O95907 504 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 STMN1P16949 149 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ZNF37AP17032 561 aaPredicted RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 MAGP20916 626 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 RPA3P35244 121 aaPredicted RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 YBX1P67809 324 aaKnown RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 TUBB4BP68371 445 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ILF2Q12905 390 aaKnown RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 NAB1Q13506 487 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 SLMAPQ14BN4 828 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ZIC1Q15915 447 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 CYP2A13Q16696 494 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 DEFB110Q30KQ9 67 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 THEMIS2Q5TEJ8 643 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 BROXQ5VW32 411 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 KIAA1614Q5VZ46 1190 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 FIGLAQ6QHK4 219 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 CDHR3Q6ZTQ4 885 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 VASH1Q7L8A9 365 aaPredicted RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 RELL1Q8IUW5 271 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 GSPT2Q8IYD1 628 aaKnown RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 OR2A1Q8NGT9 310 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 OR1L3Q8NH93 324 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 HMGCLL1Q8TB92 370 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ZNF480Q8WV37 535 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ANKRD49Q8WVL7 239 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 SMPDL3AQ92484 453 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ALKBH8Q96BT7 664 aaKnown RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 TSPAN17Q96FV3 270 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TCTN2Q96GX1 697 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 CCDC138Q96M89 665 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 CYTH2Q99418 400 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 GPR22Q99680 433 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 SLC12A9Q9BXP2 914 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TRIM54Q9BYV2 358 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 DPH1Q9BZG8 443 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ULBP3Q9BZM4 244 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TWSG1Q9GZX9 223 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 SAP130Q9H0E3 1048 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ATG10Q9H0Y0 220 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 TSPAN10Q9H1Z9 355 aaPredicted RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 FANCEQ9HB96 536 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 PARVBQ9HBI1 364 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 POPDC3Q9HBV1 291 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 UTP6Q9NYH9 597 aaKnown RBP9.71□□□□□ -0.86
RFX3-210ENST00000457373 IKZF3Q9UKT9 509 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 ACSL6Q9UKU0 697 aa9.71□□□□□ -0.86
RFX3-210ENST00000457373 URB1O60287 2271 aaKnown RBP9.7□□□□□ -0.86
RFX3-210ENST00000457373 NPEPPSL1A6NEC2 478 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 POC1B-GALNT4F8VUJ3 575 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 CDC7O00311 574 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 HCRTR1O43613 425 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 SCRG1O75711 98 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 GUCA1CO95843 209 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 NTRK1P04629 796 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 FAM153BP0C7A2 387 aa9.7□□□□□ -0.86
RFX3-210ENST00000457373 ERGP11308 486 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms