RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 HIST1H2AHQ96KK5 128 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 HIST1H2AJQ99878 128 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 H2AFJQ9BTM1 129 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 LRRC1Q9BTT6 524 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 NDC1Q9BTX1 674 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 GPR87Q9BY21 358 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 TRIM54Q9BYV2 358 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 MRPS30Q9NP92 439 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 TXLNGQ9NUQ3 528 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 UTP6Q9NYH9 597 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 EURLQ9NYK6 297 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 MOCS1Q9NZB8 636 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 FARSAQ9Y285 508 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 PCM1Q15154 2024 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 CFAP47Q6ZTR5 3102 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 TK2O00142 265 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 PRICKLE3O43900 615 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 CCNDBP1O95273 360 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 F8A1P23610 371 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 ILF2Q12905 390 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 TBR1Q16650 682 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 BORAQ6PGQ7 559 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 SPNS2Q8IVW8 549 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 DSELQ8IZU8 1212 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 ZNF655Q8N720 491 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 SLC38A9Q8NBW4 561 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 FBXO15Q8NCQ5 510 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 OR2L3Q8NG85 312 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 OR2A1Q8NGT9 310 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 TTC9Q92623 222 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 LRFN5Q96NI6 719 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 BBC3Q96PG8 261 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 TWSG1Q9GZX9 223 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 CHST8Q9H2A9 424 aa17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 AKIRIN1Q9H9L7 192 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 GPN3Q9UHW5 284 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-215ENST00000456545 CTAGE15A4D2H0 777 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 ZSCAN9O15535 394 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CREG1O75629 220 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 SLC16A8O95907 504 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 GSTA2P09210 222 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CTAGE8P0CG41 777 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 ALAS2P22557 587 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 GUCY2DQ02846 1103 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CDC20Q12834 499 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CBLBQ13191 982 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 LY6DQ14210 128 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 DEFB109BQ30KR1 87 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 FCRL6Q6DN72 434 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CTAGE6Q86UF2 777 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CTAGE4Q8IX94 777 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 PPFIBP2Q8ND30 876 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 FBXO25Q8TCJ0 367 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 ZNF480Q8WV37 535 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 SEC14L1Q92503 715 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 ALKBH8Q96BT7 664 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 VPS39Q96JC1 886 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 CCDC138Q96M89 665 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 DPH2Q9BQC3 489 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 SELENOSQ9BQE4 189 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 DPH7Q9BTV6 452 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 PARVBQ9HBI1 364 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 NDOR1Q9UHB4 597 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 TAC3Q9UHF0 121 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 SRPK3Q9UPE1 567 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 LAMA5O15230 3695 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 FAM208BQ5VWN6 2430 aa17.37■□□□□ 0.37
PDLIM2-215ENST00000456545 FAM95CA0A1B0GW59 222 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 CDC14CA4D256 554 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 C9J4A7 227 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 SLC16A5O15375 505 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 HCRTR1O43613 425 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 FDXRP22570 491 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 PTPN4P29074 926 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 MAGEA4P43358 317 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 CCR10P46092 362 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 GABRA4P48169 554 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 ARSFP54793 590 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 TIAL1Q01085 375 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 SP140Q13342 867 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 TRADDQ15628 312 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 PTCHD3Q3KNS1 767 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 TCTE1Q5JU00 501 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 C1orf189Q5VU69 101 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 ZC3HC1Q86WB0 502 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 CTAGE3PQ8IX95 158 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 TTC29Q8NA56 475 aaPredicted RBP17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 DLG3Q92796 817 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 ACTL8Q9H568 366 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 PCDHGA6Q9Y5G7 932 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 PSAT1Q9Y617 370 aa17.36■□□□□ 0.37
PDLIM2-215ENST00000456545 NBEAQ8NFP9 2946 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 SPTBP11277 2137 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 A0A0J9YVX5 310 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 A0A1W2PPV9 198 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 ESYT3A0FGR9 886 aa17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 SRPX2O60687 465 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 EIF2S1P05198 315 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-215ENST00000456545 ERGP11308 486 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms