RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 STRADBQ9C0K7 418 aa17.97■□□□□ 0.47
SBDSP1-205ENST00000456312 OCIAD1Q9NX40 245 aa17.97■□□□□ 0.47
SBDSP1-205ENST00000456312 SATB2Q9UPW6 733 aa17.97■□□□□ 0.47
SBDSP1-205ENST00000456312 LOXL2Q9Y4K0 774 aa17.97■□□□□ 0.47
SBDSP1-205ENST00000456312 ACACAQ13085 2346 aa17.97■□□□□ 0.47
SBDSP1-205ENST00000456312 IGF2RP11717 2491 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 SLC9B1P1A6NJY1 282 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ZNF839A8K0R7 811 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ISM1B1AKI9 464 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 B4E171 279 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 TARM1B6A8C7 271 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 TAPBPO15533 448 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 KLK8O60259 260 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 PRAMEF10O60809 474 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ERLIN1O75477 346 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 DXOO77932 396 aaKnown RBP17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ZBTB11O95625 1053 aaPredicted RBP17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 GUCA1CO95843 209 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 CAPNS1P04632 268 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 HIST1H2AGP0C0S8 130 aaPredicted RBP17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 MSL3P1P0C860 447 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 FGF3P11487 239 aaPredicted RBP17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 CCL4P13236 92 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 HGFP14210 728 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 HIST1H2ADP20671 130 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 GGT5P36269 586 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 TSPAN7P41732 249 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 FOXK2Q01167 660 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 TNFAIP8L3Q5GJ75 292 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 SYTL1Q8IYJ3 562 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 STAG3L4Q8TBR4 150 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 GATA6Q92908 595 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 HIST1H2AHQ96KK5 128 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ZIM3Q96PE6 472 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 OR4K3Q96R72 315 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 CMKLR1Q99788 373 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 HIST1H2AJQ99878 128 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 H2AFJQ9BTM1 129 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 TRIM54Q9BYV2 358 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ZMYND15Q9H091 742 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ATG10Q9H0Y0 220 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 POLR1BQ9H9Y6 1135 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 SLC6A20Q9NP91 592 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 PCMTD2Q9NV79 361 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 INTS7Q9NVH2 962 aaKnown RBP17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 SH2B3Q9UQQ2 575 aa17.96■□□□□ 0.47
SBDSP1-205ENST00000456312 ZFHX4Q86UP3 3567 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 SMIM23A6NLE4 172 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 PLD2O14939 933 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 RASSF9O75901 435 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 ANXA5P08758 320 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 ITIH1P19827 911 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 MAGP20916 626 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 CDH3P22223 829 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 GLRBP48167 497 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 PPM1FP49593 454 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 SEPHS1P49903 392 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 HNMTP50135 292 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 SH3BP2P78314 561 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 SLC18A2Q05940 514 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 PRDX1Q06830 199 aaKnown RBP17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 NAE1Q13564 534 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 TSNAXIP1Q2TAA8 658 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 C18orf21Q32NC0 220 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 C3orf38Q5JPI3 329 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 FCRL6Q6DN72 434 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 TRABD2AQ86V40 505 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 LCA5Q86VQ0 697 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 GPSM1Q86YR5 675 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 C19orf47Q8N9M1 422 aaKnown RBP17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 ATL1Q8WXF7 558 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 PMEPA1Q969W9 287 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 FAM60AQ9NP50 221 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 ASCL3Q9NQ33 180 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 CCDC177Q9NQR7 707 aaPredicted RBP17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 TAC3Q9UHF0 121 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 PTBP2Q9UKA9 531 aaKnown RBP17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 ANGPTL2Q9UKU9 493 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 PCDHB11Q9Y5F2 797 aa17.95■□□□□ 0.46
SBDSP1-205ENST00000456312 OR2A25A4D2G3 310 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 TRABD2BA6NFA1 517 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 CDRT15L2A8MXV6 281 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 H3BMH7 237 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 HCRTR1O43613 425 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 NRP2O60462 931 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 PYGBP11216 843 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 FOLR1P15328 257 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 CSTF2P33240 577 aaKnown RBP eCLIP17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 GRIA3P42263 894 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 HSD11B2P80365 405 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 MC2RQ01718 297 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 PTCHD3Q3KNS1 767 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 ICE2Q659A1 982 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 ZNF425Q6IV72 752 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 LCTLQ6UWM7 567 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 CDHR3Q6ZTQ4 885 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 FRA10AC1Q70Z53 315 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 FBXO39Q8N4B4 442 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 UBTD2Q8WUN7 234 aa17.94■□□□□ 0.46
SBDSP1-205ENST00000456312 PYCR2Q96C36 320 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms