RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ERGP11308 486 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 ENO3P13929 434 aaPredicted RBP20.37■□□□□ 0.85
HMGB3-205ENST00000455596 IVDP26440 423 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 PAFAH1B1P43034 410 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 DR1Q01658 176 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 ARHGAP19Q14CB8 494 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 NAA25Q14CX7 972 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 TCTE1Q5JU00 501 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 SPANXN3Q5MJ09 141 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 FAM69BQ5VUD6 431 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 INPP5DQ92835 1189 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 GPR21Q99679 349 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 AARSD1Q9BTE6 412 aaKnown RBP20.37■□□□□ 0.85
HMGB3-205ENST00000455596 TRIM55Q9BYV6 548 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 TRIM4Q9C037 500 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 ING2Q9H160 280 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 IFT80Q9P2H3 777 aaPredicted RBP20.37■□□□□ 0.85
HMGB3-205ENST00000455596 KLK4Q9Y5K2 254 aa20.37■□□□□ 0.85
HMGB3-205ENST00000455596 ZNF839A8K0R7 811 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 CCDC188H7C350 402 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 VPS26AO75436 327 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 CMPK1P30085 196 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 HSD17B2P37059 387 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 MORF4L2Q15014 288 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 BBS9Q3SYG4 887 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 MSS51Q4VC12 460 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 CPZQ66K79 652 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 RAB43Q86YS6 212 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 C2CD4AQ8NCU7 369 aaPredicted RBP20.36■□□□□ 0.85
HMGB3-205ENST00000455596 CD200R1Q8TD46 325 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 SMPDL3AQ92484 453 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 PKP4Q99569 1192 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 SELENOSQ9BQE4 189 aa20.36■□□□□ 0.85
HMGB3-205ENST00000455596 SMAPO00193 183 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 KLF7O75840 302 aaPredicted RBP20.35■□□□□ 0.85
HMGB3-205ENST00000455596 ATXN8OSP0DMR3 200 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 ERVK-10P10266 1014 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 NR1D1P20393 614 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 ALAS2P22557 587 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 RPA3P35244 121 aaPredicted RBP20.35■□□□□ 0.85
HMGB3-205ENST00000455596 GCGRP47871 477 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 CHAF1BQ13112 559 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 GRM7Q14831 915 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 NKAIN1Q4KMZ8 207 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 YOD1Q5VVQ6 348 aaPredicted RBP20.35■□□□□ 0.85
HMGB3-205ENST00000455596 UGT3A1Q6NUS8 523 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 SUSD1Q6UWL2 747 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 PDIK1LQ8N165 341 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 TTC29Q8NA56 475 aaPredicted RBP20.35■□□□□ 0.85
HMGB3-205ENST00000455596 FBXO15Q8NCQ5 510 aaPredicted RBP20.35■□□□□ 0.85
HMGB3-205ENST00000455596 ACAT2Q9BWD1 397 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 RNF14Q9UBS8 474 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 PCSK5Q92824 1860 aa20.35■□□□□ 0.85
HMGB3-205ENST00000455596 A0A1B0GX78 115 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 K7EM74 188 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 EIF3FO00303 357 aaPredicted RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 ZBTB14O43829 449 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 SRPX2O60687 465 aaPredicted RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 CTSVO60911 334 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 SYF2O95926 243 aaKnown RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 FOLR3P41439 243 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 CCL11P51671 97 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 PNLIPRP1P54315 467 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 KLRB1Q12918 225 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 TSTA3Q13630 321 aaPredicted RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 SSPNQ14714 243 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 SLC9A5Q14940 896 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 TTLL10Q6ZVT0 673 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 ASB18Q6ZVZ8 466 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 MED25Q71SY5 747 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 CPNE9Q8IYJ1 553 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 ASB11Q8WXH4 323 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 CERS2Q96G23 380 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 ZNF285Q96NJ3 590 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 TRIM51Q9BSJ1 452 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 MRPS30Q9NP92 439 aaKnown RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 ENAMQ9NRM1 1142 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 CUTCQ9NTM9 273 aa20.34■□□□□ 0.85
HMGB3-205ENST00000455596 TRMT6Q9UJA5 497 aaKnown RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 PTRH2Q9Y3E5 179 aaKnown RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 TLN1Q9Y490 2541 aaKnown RBP20.34■□□□□ 0.85
HMGB3-205ENST00000455596 A0A0J9YVX5 310 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 GFYI3L273 518 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 DSCR3O14972 297 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 TTI1O43156 1089 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 WISP1O95388 367 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 PIM1P11309 404 aaPredicted RBP20.33■□□□□ 0.85
HMGB3-205ENST00000455596 MCM3P25205 808 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 OTX2P32243 289 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 CASRP41180 1078 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 ELK3P41970 407 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 ITGA8P53708 1063 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 RRADP55042 308 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 VSX2P58304 361 aaPredicted RBP20.33■□□□□ 0.85
HMGB3-205ENST00000455596 TLE1Q04724 770 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 FAM214AQ32MH5 1076 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 LRRC8EQ6NSJ5 796 aa20.33■□□□□ 0.85
HMGB3-205ENST00000455596 HIBCHQ6NVY1 386 aaPredicted RBP20.33■□□□□ 0.85
HMGB3-205ENST00000455596 MRPL14Q6P1L8 145 aaKnown RBP20.33■□□□□ 0.85
HMGB3-205ENST00000455596 CYHR1Q6ZMK1 362 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms