RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TMEM139Q8IV31 216 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CLEC18CQ8NCF0 446 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 OR11H4Q8NGC9 324 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 PSMA8Q8TAA3 256 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 PPP4R1Q8TF05 950 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 UBLCP1Q8WVY7 318 aaPredicted RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 OXNAD1Q96HP4 312 aaPredicted RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CDKN2AIPNLQ96HQ2 116 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 NAP1L5Q96NT1 182 aaPredicted RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 NDNQ99608 321 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CARD9Q9H257 536 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 MAGEF1Q9HAY2 307 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 TRPC7Q9HCX4 862 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 GSN-AS1Q9NRJ2 163 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 TRIM10Q9UDY6 481 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 DAPK2Q9UIK4 370 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 HOOK1Q9UJC3 728 aaKnown RBP3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 AMDHD2Q9Y303 409 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 ATP8B3O60423 1300 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 FAM205AQ6ZU69 1335 aa3.93□□□□□ -1.78
HMGN3P1-201ENST00000453847 CKAP5Q14008 2032 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 A0A087X0K7 114 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 A0A0B4J203 849 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 MED19A0JLT2 244 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ANKRD66B4E2M5 251 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 CCL24O00175 119 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 CACNB4O00305 520 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 GAPDHSO14556 408 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ACSL4O60488 711 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 SERPINI2O75830 405 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 TRIM16O95361 564 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 NUDT3O95989 172 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 PDGFBP01127 241 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 TGFAP01135 160 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 SERPING1P05155 500 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 GHRP10912 638 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ACP1P24666 158 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 PIK3R1P27986 724 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 HOXD3P31249 432 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ROR2Q01974 943 aaKnown RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ILF2Q12905 390 aaKnown RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 GTF2H2Q13888 395 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 GAMTQ14353 236 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 NONOQ15233 471 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 TMEM35AQ53FP2 167 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 IFI44LQ53G44 452 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 C12orf60Q5U649 245 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 FAM46CQ5VWP2 391 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 OR7E24Q6IFN5 339 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 C11orf63Q6NUN7 778 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 GTF2H2CQ6P1K8 395 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ABRAXAS1Q6UWZ7 409 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 SIGLEC15Q6ZMC9 328 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 CCNI2Q6ZMN8 369 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNF704Q6ZNC4 412 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 TOM1L2Q6ZVM7 507 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ARMC9Q7Z3E5 817 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ADAMTSL2Q86TH1 951 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 MMD2Q8IY49 270 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 CLIP4Q8N3C7 705 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 NANOGP1Q8N7R0 232 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 IPMKQ8NFU5 416 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 OR4K1Q8NGD4 311 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 EXOC6Q8TAG9 804 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 ALG14Q96F25 216 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 THOC1Q96FV9 657 aaKnown RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 SCAND2PQ9GZW5 306 aaPredicted RBP3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 A4GALTQ9NPC4 353 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 FZD10Q9ULW2 581 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 NUDCQ9Y266 331 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 TRIM17Q9Y577 477 aa3.92□□□□□ -1.78
HMGN3P1-201ENST00000453847 A0A0G2JNG1 304 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 ANKDD1BA6NHY2 528 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 OR6C75A6NL08 312 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 C15orf62A8K5M9 175 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 ZNHIT1O43257 154 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 MOCS2O96007 188 aaPredicted RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 IFNB1P01574 187 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 C9P02748 559 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 HEXBP07686 556 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 IRF2P14316 349 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 POLR2CP19387 275 aaPredicted RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 SFNP31947 248 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 ARRB2P32121 409 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 SLC26A5P58743 744 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 CX3CL1P78423 397 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 RELQ04864 619 aaPredicted RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 KIR2DS5Q14953 304 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 RABEP1Q15276 862 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 UGP2Q16851 508 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 ITPRIPL2Q3MIP1 535 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 NDUFAF5Q5TEU4 345 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 LRRC38Q5VT99 294 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 LYSMD4Q5XG99 296 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 PM20D1Q6GTS8 502 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 OR6B2Q6IFH4 312 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 RHBDF2Q6PJF5 856 aa3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 PIWIL4Q7Z3Z4 852 aaKnown RBP3.91□□□□□ -1.78
HMGN3P1-201ENST00000453847 NUDT13Q86X67 352 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms