RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 IGHEP01854 428 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 PSMB5P28074 263 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 KLHL38Q2WGJ6 581 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 FAM214AQ32MH5 1076 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 TTLL9Q3SXZ7 439 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 NADK2Q4G0N4 442 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 YOD1Q5VVQ6 348 aaPredicted RBP12.36□□□□□ -0.43
CHD3-206ENST00000452447 MRPL14Q6P1L8 145 aaKnown RBP12.36□□□□□ -0.43
CHD3-206ENST00000452447 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 TTC29Q8NA56 475 aaPredicted RBP12.36□□□□□ -0.43
CHD3-206ENST00000452447 OR2L3Q8NG85 312 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 OSBPL9Q96SU4 736 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 TRIM56Q9BRZ2 755 aaKnown RBP12.36□□□□□ -0.43
CHD3-206ENST00000452447 NUDT9Q9BW91 350 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 SPATA7Q9P0W8 599 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 FAM169AQ9Y6X4 670 aa12.36□□□□□ -0.43
CHD3-206ENST00000452447 DSCR3O14972 297 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 PHF2O75151 1096 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 CATP04040 527 aaKnown RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 CMPK1P30085 196 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 CTBP1Q13363 440 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 TSTA3Q13630 321 aaPredicted RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 GBX1Q14549 363 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 NAA25Q14CX7 972 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 PPP1R7Q15435 360 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 CYP2A13Q16696 494 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 ACSBG2Q5FVE4 666 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 HPS6Q86YV9 775 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 LMNTD2Q8IXW0 634 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 SLC35F6Q8N357 371 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 CALML6Q8TD86 181 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 ACTRT1Q8TDG2 376 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 COG1Q8WTW3 980 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 MIB2Q96AX9 1013 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 C20orf96Q9NUD7 363 aaPredicted RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 P4HTMQ9NXG6 502 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 USP9XQ93008 2570 aaPredicted RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 A0A0J9YVX5 310 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 ZNF839A8K0R7 811 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 KIF5CO60282 957 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 KLHL41O60662 606 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 CTSVO60911 334 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 VPS4BO75351 444 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 MCM3P25205 808 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 RPA3P35244 121 aaPredicted RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 HSD17B2P37059 387 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 FNTAP49354 379 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 VSX2P58304 361 aaPredicted RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 RAPSNQ13702 412 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 FASTKQ14296 549 aaKnown RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 LONRF1Q17RB8 773 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 DCAF10Q5QP82 559 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 WASHC2DQ5SRD0 308 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 OVCH1Q7RTY7 1134 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 DENND6AQ8IWF6 608 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 PPIL6Q8IXY8 311 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 OR2A1Q8NGT9 310 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 CPT1CQ8TCG5 803 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 SMPDL3AQ92484 453 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 FKBP10Q96AY3 582 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 ACAT2Q9BWD1 397 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 FBXO6Q9NRD1 293 aaPredicted RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 GALPQ9UBC7 116 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 ZC3H7BQ9UGR2 993 aaKnown RBP12.35□□□□□ -0.43
CHD3-206ENST00000452447 VPS4AQ9UN37 437 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 NEU2Q9Y3R4 380 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 KLK4Q9Y5K2 254 aa12.35□□□□□ -0.43
CHD3-206ENST00000452447 SHANK1Q9Y566 2161 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 MAST4O15021 2626 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 ZCWPW2A0A1B0GU75 182 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 A0A1W2PPV9 198 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 HYKKA2RU49 373 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 FITM1A5D6W6 292 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 ARHGEF33A8MVX0 844 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 CNOT3O75175 753 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 PSIP1O75475 530 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 ALBP02768 609 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 ALPPP05187 535 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 EIF2S1P05198 315 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 MAGEA3P43357 314 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 GCGRP47871 477 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 CD97P48960 835 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 CLCN7P51798 805 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 FOXL2P58012 376 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 UBAP2LQ14157 1087 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 ARHGAP19Q14CB8 494 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 SUSD1Q6UWL2 747 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 NEK10Q6ZWH5 1172 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 REXO1L1PQ8IX06 675 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 NAT8LQ8N9F0 302 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 KCNJ9Q92806 393 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 NACC2Q96BF6 587 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 ZNF285Q96NJ3 590 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 SMAD5Q99717 465 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 DPH7Q9BTV6 452 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 WDR54Q9H977 334 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms