RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ZNF37AP17032 561 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 WT1P19544 449 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 CYP2A7P20853 494 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 SP140Q13342 867 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 SLMAPQ14BN4 828 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 LINC00303Q3SY05 128 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 NKAPQ8N5F7 415 aaKnown RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 EXD3Q8N9H8 876 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 C19orf47Q8N9M1 422 aaKnown RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 OR8K5Q8NH50 307 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 ZNF480Q8WV37 535 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 ZNF501Q96CX3 271 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 TCTN2Q96GX1 697 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 FCRL4Q96PJ5 515 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 CYTH2Q99418 400 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 KLHL25Q9H0H3 589 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 PILRAQ9UKJ1 303 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 PDE10AQ9Y233 779 aa19.22■□□□□ 0.67
COL9A3-202ENST00000452372 TMEM184BQ9Y519 407 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 ASH1LQ9NR48 2969 aaKnown RBP19.22■□□□□ 0.67
COL9A3-202ENST00000452372 A0A1W2PPV9 198 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 ZNF839A8K0R7 811 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 FAM155BO75949 473 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 SYF2O95926 243 aaKnown RBP19.21■□□□□ 0.67
COL9A3-202ENST00000452372 PNLIPRP1P54315 467 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 SLC12A2P55011 1212 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 FASTKQ14296 549 aaKnown RBP19.21■□□□□ 0.67
COL9A3-202ENST00000452372 USP10Q14694 798 aaKnown RBP19.21■□□□□ 0.67
COL9A3-202ENST00000452372 GPR19Q15760 415 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 ZIC1Q15915 447 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 OR2A1Q8NGT9 310 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 SMPDL3AQ92484 453 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 ANKRD7Q92527 254 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 TSPAN17Q96FV3 270 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 CCDC138Q96M89 665 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 ACSS3Q9H6R3 686 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 GPAMQ9HCL2 828 aa19.21■□□□□ 0.67
COL9A3-202ENST00000452372 SPTA1P02549 2419 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 E7ENX8 843 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 STK17BO94768 372 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 WISP3O95389 354 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-202ENST00000452372 ACSL3O95573 720 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 TAP2Q03519 686 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 ZNF460Q14592 562 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 EFTUD2Q15029 972 aaKnown RBP eCLIP19.2■□□□□ 0.664e-7■■■■■ 32.4
COL9A3-202ENST00000452372 TEX35Q5T0J7 233 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 UBAP2Q5T6F2 1119 aaKnown RBP19.2■□□□□ 0.66
COL9A3-202ENST00000452372 CDHR3Q6ZTQ4 885 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 FAM20CQ8IXL6 584 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 EIF1ADQ8N9N8 165 aaKnown RBP19.2■□□□□ 0.66
COL9A3-202ENST00000452372 ZUFSPQ96AP4 578 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 MED8Q96G25 268 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 FANCEQ9HB96 536 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 FAM60AQ9NP50 221 aa19.2■□□□□ 0.66
COL9A3-202ENST00000452372 INTS7Q9NVH2 962 aaKnown RBP19.2■□□□□ 0.66
COL9A3-202ENST00000452372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.2■□□□□ 0.66
COL9A3-202ENST00000452372 DLGAP3O95886 979 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 HIST1H2AGP0C0S8 130 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-202ENST00000452372 STMN1P16949 149 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 HIST1H2ADP20671 130 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 MAGP20916 626 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 IMPA1P29218 277 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 ZKSCAN8Q15776 578 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-202ENST00000452372 PHKG1Q16816 387 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 PWWP2BQ6NUJ5 590 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 VASH2Q86V25 355 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 LRRC56Q8IYG6 542 aaPredicted RBP19.19■□□□□ 0.66
COL9A3-202ENST00000452372 SYTL1Q8IYJ3 562 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 OR2L3Q8NG85 312 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 ANKRD49Q8WVL7 239 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 NKD1Q969G9 470 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 HIST1H2AHQ96KK5 128 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 HIST1H2AJQ99878 128 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 H2AFJQ9BTM1 129 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 ULBP3Q9BZM4 244 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 CAB39LQ9H9S4 337 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 KLK4Q9Y5K2 254 aa19.19■□□□□ 0.66
COL9A3-202ENST00000452372 TARM1B6A8C7 271 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 TIAF1O95411 115 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 ENO2P09104 434 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-202ENST00000452372 ZNF28P17035 718 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 PSMB5P28074 263 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 GABRA4P48169 554 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 FIGLAQ6QHK4 219 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 SUSD1Q6UWL2 747 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 TIPARPQ7Z3E1 657 aaKnown RBP19.18■□□□□ 0.66
COL9A3-202ENST00000452372 DNAJC22Q8N4W6 341 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 PPFIBP2Q8ND30 876 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 MIPEPQ99797 713 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 TRIM54Q9BYV2 358 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 STOX2Q9P2F5 926 aaPredicted RBP19.18■□□□□ 0.66
COL9A3-202ENST00000452372 SERTAD3Q9UJW9 196 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 IKZF3Q9UKT9 509 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 NOVA2Q9UNW9 492 aaKnown RBP19.18■□□□□ 0.66
COL9A3-202ENST00000452372 KLHL20Q9Y2M5 609 aa19.18■□□□□ 0.66
COL9A3-202ENST00000452372 SEC16AO15027 2179 aa19.17■□□□□ 0.66
COL9A3-202ENST00000452372 HEATR5BQ9P2D3 2071 aa19.17■□□□□ 0.66
COL9A3-202ENST00000452372 B8ZZF3 427 aa19.17■□□□□ 0.66
COL9A3-202ENST00000452372 TMEM150CB9EJG8 249 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms