RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SIM2Q14190 667 aaPredicted RBP10.42□□□□□ -0.74
PKP4-206ENST00000452162 CST6Q15828 149 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 POM121L1PQ3SYA9 428 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 OR52E8Q6IFG1 317 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 FBXL19Q6PCT2 694 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 LRRC70Q7Z2Q7 622 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 TECPR1Q7Z6L1 1165 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 KIAA2013Q8IYS2 634 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 USP7Q93009 1102 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 RIOK2Q9BVS4 552 aaKnown RBP10.42□□□□□ -0.74
PKP4-206ENST00000452162 TRIM8Q9BZR9 551 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 VCXQ9H320 206 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 SLC32A1Q9H598 525 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 ITM2CQ9NQX7 267 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 ASIC5Q9NY37 505 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 USP36Q9P275 1121 aaKnown RBP10.42□□□□□ -0.74
PKP4-206ENST00000452162 KLQ9UEF7 1012 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 SERGEFQ9UGK8 458 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 CNOT6Q9ULM6 557 aaKnown RBP10.42□□□□□ -0.74
PKP4-206ENST00000452162 KNL1Q8NG31 2342 aa10.42□□□□□ -0.74
PKP4-206ENST00000452162 IGHV1OR15-9A0A0B4J2B8 117 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 AQP12BA6NM10 295 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 ZNF839A8K0R7 811 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 PLK4O00444 970 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 KPNA5O15131 536 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 RSL1D1O76021 490 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 DNTTP04053 509 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 NFKBIAP25963 317 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 GSK3BP49841 420 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 RPL38P63173 70 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 MED21Q13503 144 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 BOP1Q14137 746 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 KIAA0040Q15053 153 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 RABL3Q5HYI8 236 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 SLC2A7Q6PXP3 512 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 NEK10Q6ZWH5 1172 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 CEP68Q76N32 757 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 FAM124AQ86V42 546 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 PTRH1Q86Y79 214 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 GALNT13Q8IUC8 556 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 AQP12AQ8IXF9 295 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 GOLM1Q8NBJ4 401 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 PIP4K2CQ8TBX8 421 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 LRTOMTQ8WZ04 291 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 ZSCAN5AQ9BUG6 496 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 TRIM15Q9C019 465 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 ARMC1Q9NVT9 282 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 SLAMF8Q9P0V8 285 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 ACTR3BQ9P1U1 418 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 CNOT11Q9UKZ1 510 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 ZNF490Q9ULM2 529 aaPredicted RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 KCNE1BA0A087WTH5 132 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 A0A1W2PP55 124 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 C16orf96A6NNT2 1141 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 IFRD1O00458 451 aaPredicted RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 ARPC2O15144 300 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 DENRO43583 198 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 ZNF217O75362 1048 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 ULK1O75385 1050 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 CLDN9O95484 217 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 STAMBPO95630 424 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 LINGO3P0C6S8 592 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 SLC2A4P14672 509 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 GRIA3P42263 894 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 EEFSECP57772 596 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 GGTA1PQ4G0N0 100 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 HMBOX1Q6NT76 420 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 DLEU7Q6UYE1 221 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 PARS2Q7L3T8 475 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 AADATQ8N5Z0 425 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 SUMF1Q8NBK3 374 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 DNAJB14Q8TBM8 379 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 SPACA7Q96KW9 195 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 VPS35Q96QK1 796 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 MUC13Q9H3R2 512 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 CCM2LQ9NUG4 571 aaPredicted RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 INTS7Q9NVH2 962 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 RAB26Q9ULW5 256 aa10.41□□□□□ -0.74
PKP4-206ENST00000452162 TNRC6BQ9UPQ9 1833 aaKnown RBP10.41□□□□□ -0.74
PKP4-206ENST00000452162 C15orf38-AP3S2A0A0A6YYH1 394 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 FTH1P02794 183 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ZNF26P17031 533 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 VARSP26640 1264 aaKnown RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 HNMTP50135 292 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 HMGCS1Q01581 520 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 LIPEQ05469 1076 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 MAD2L1Q13257 205 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 FXNQ16595 210 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 PLK5Q496M5 336 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ZNF648Q5T619 568 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 CAPRIN2Q6IMN6 1127 aaKnown RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 NANOGP8Q6NSW7 305 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 LIPIQ6XZB0 460 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 ARPINQ7Z6K5 226 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 APLFQ8IW19 511 aaPredicted RBP10.4□□□□□ -0.74
PKP4-206ENST00000452162 RGL4Q8IZJ4 473 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 MARVELD2Q8N4S9 558 aa10.4□□□□□ -0.74
PKP4-206ENST00000452162 DEFB119Q8N690 84 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms