RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 GCN1Q92616 2671 aaKnown RBP16.5■□□□□ 0.23
PRPF40A-204ENST00000450303 SLC9B1P1A6NJY1 282 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 B8ZZF3 427 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 BTN3A1O00481 513 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 RGS16O15492 202 aaPredicted RBP16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 KATNA1O75449 491 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 NTRK1P04629 796 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 F7P08709 466 aaPredicted RBP16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 PLA2G2AP14555 144 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 KRT15P19012 456 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 NR1D1P20393 614 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 SAT1P21673 171 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 CD9P21926 228 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 CDH3P22223 829 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 HSD11B2P80365 405 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 NFKB2Q00653 900 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 ACY1Q03154 408 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 RPA4Q13156 261 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 PDAP1Q13442 181 aaKnown RBP16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 BOP1Q14137 746 aaKnown RBP16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 MAP7Q14244 749 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 CTSL3PQ5NE16 218 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 D2HGDHQ8N465 521 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 OR5AR1Q8NGP9 310 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 STARD8Q92502 1023 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 KCNJ9Q92806 393 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 NDNQ99608 321 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 EFHD1Q9BUP0 239 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 KLHL25Q9H0H3 589 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 SOHLH2Q9NX45 425 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 SLC39A10Q9ULF5 831 aa16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 MTO1Q9Y2Z2 717 aaKnown RBP16.49■□□□□ 0.23
PRPF40A-204ENST00000450303 SPTBP11277 2137 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 ZNF462Q96JM2 2506 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 TRIM49D1C9J1S8 452 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 LIN7AO14910 233 aaPredicted RBP16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 SHOX2O60902 331 aaPredicted RBP16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 ZBTB11O95625 1053 aaPredicted RBP16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 CCNYL3P0C7X3 344 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 STMN1P16949 149 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 SERPINB8P50452 374 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 CDC20Q12834 499 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 TTLL9Q3SXZ7 439 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 SYTL3Q4VX76 610 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 RBM20Q5T481 1227 aaKnown RBP16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 ZNF549Q6P9A3 640 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 BORAQ6PGQ7 559 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 CCDC91Q7Z6B0 441 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 KMT5CQ86Y97 462 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 CABS1Q96KC9 395 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 MVB12BQ9H7P6 319 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 AKIRIN1Q9H9L7 192 aaPredicted RBP16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 POPDC3Q9HBV1 291 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 SYTL2Q9HCH5 934 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 KLHL42Q9P2K6 505 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 LGALS13Q9UHV8 139 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 TRMT6Q9UJA5 497 aaKnown RBP16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 POMT2Q9UKY4 750 aa16.48■□□□□ 0.23
PRPF40A-204ENST00000450303 IQCF5A8MTL0 148 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 PYCARD-AS1I3L0S3 204 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 NIPSNAP2O75323 286 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 MT-ND3P03897 115 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 APOA4P06727 396 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TCN2P20062 427 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 FDXRP22570 491 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 CRABP2P29373 138 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TYK2P29597 1187 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 PRDX3P30048 256 aaKnown RBP16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 PLOD1Q02809 727 aaPredicted RBP16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 BMPR2Q13873 1038 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 DEFB109BQ30KR1 87 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TMTC4Q5T4D3 741 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 CYB5D1Q6P9G0 228 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 FAM199XQ6PEV8 388 aaPredicted RBP16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TIFABQ6ZNK6 161 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 RAPH1Q70E73 1250 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 OTOAQ7RTW8 1153 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 AMIGO1Q86WK6 493 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 LKAAEAR1Q8TD35 194 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 INPP5DQ92835 1189 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TFB2MQ9H5Q4 396 aaKnown RBP16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 LATS2Q9NRM7 1088 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 CTNNAL1Q9UBT7 734 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TLK1Q9UKI8 766 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 PADI1Q9ULC6 663 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 PLAGL1Q9UM63 463 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 ICKQ9UPZ9 632 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 TDRKHQ9Y2W6 561 aaKnown RBP16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 DHRS7Q9Y394 339 aa16.47■□□□□ 0.23
PRPF40A-204ENST00000450303 SLC5A10A0PJK1 596 aa16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 ZIC2O95409 532 aaPredicted RBP16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 PVRP15151 417 aa16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 ST6GAL1P15907 406 aa16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 ACADLP28330 430 aa16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 CCR7P32248 378 aa16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 CCR10P46092 362 aa16.46■□□□□ 0.23
PRPF40A-204ENST00000450303 TAS2R39P59534 338 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms